RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RRNAD1Q96FB5 475 aaKnown RBP11.38□□□□□ -0.59
CHD1-202ENST00000414220 PDCD10Q9BUL8 212 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 ELOVL1Q9BW60 279 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 HINT2Q9BX68 163 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 ALX4Q9H161 411 aaPredicted RBP11.38□□□□□ -0.59
CHD1-202ENST00000414220 GPR132Q9UNW8 380 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 V9GYH0 126 aa11.38□□□□□ -0.59
CHD1-202ENST00000414220 TEX50A0A1B0GTY4 177 aa11.37□□□□□ -0.59
CHD1-202ENST00000414220 TRIQKQ629K1 86 aa11.37□□□□□ -0.59
CHD1-202ENST00000414220 ZNF57Q68EA5 555 aaPredicted RBP11.37□□□□□ -0.59
CHD1-202ENST00000414220 ZNF343Q6P1L6 599 aa11.37□□□□□ -0.59
CHD1-202ENST00000414220 MRGPRFQ96AM1 343 aa11.37□□□□□ -0.59
CHD1-202ENST00000414220 SEC22AQ96IW7 307 aa11.37□□□□□ -0.59
CHD1-202ENST00000414220 AKIP1Q9NQ31 210 aa11.37□□□□□ -0.59
CHD1-202ENST00000414220 FBXL7Q9UJT9 491 aa11.37□□□□□ -0.59
CHD1-202ENST00000414220 TRBV9A0A0B4J1U6 114 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 ANKRD34BA5PLL1 514 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 OR2J3O76001 311 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 PRH1P02810 166 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 ANXA3P12429 323 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 CTRB1P17538 263 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 RPEL1Q2QD12 228 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 C15orf32Q32M92 178 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 CTRB2Q6GPI1 263 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 ZNF429Q86V71 674 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 DCUN1D4Q92564 292 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 EEF1AKMT3Q96AZ1 226 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 CXorf58Q96LI9 332 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 OR4C12Q96R67 309 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 TP53RKQ96S44 253 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 NAA60Q9H7X0 242 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 NSG2Q9Y328 171 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 VWFP04275 2813 aa11.36□□□□□ -0.59
CHD1-202ENST00000414220 C15orf61A6NNL5 157 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 CENPXA8MT69 81 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 E7EUB6 86 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 OR13C7P0DN81 318 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 MYOD1P15172 320 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 AREGP15514 252 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 UCP1P25874 307 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 SLURP1P55000 103 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 ZNF45Q02386 682 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 EXOSC2Q13868 293 aaKnown RBP11.35□□□□□ -0.59
CHD1-202ENST00000414220 KLF9Q13886 244 aaPredicted RBP11.35□□□□□ -0.59
CHD1-202ENST00000414220 ZNF79Q15937 498 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 SP6Q3SY56 376 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 PDLIM3Q53GG5 364 aaPredicted RBP11.35□□□□□ -0.59
CHD1-202ENST00000414220 FAM219AQ8IW50 185 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 DLX4Q92988 240 aaPredicted RBP11.35□□□□□ -0.59
CHD1-202ENST00000414220 SLC25A21Q9BQT8 299 aaPredicted RBP11.35□□□□□ -0.59
CHD1-202ENST00000414220 RTBDNQ9BSG5 229 aaPredicted RBP11.35□□□□□ -0.59
CHD1-202ENST00000414220 C5orf66Q9H5L9 145 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 NDUFA4L2Q9NRX3 87 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 CACFD1Q9UGQ2 172 aa11.35□□□□□ -0.59
CHD1-202ENST00000414220 NAP1L6A6NFF2 107 aa11.34□□□□□ -0.59
CHD1-202ENST00000414220 IGKV1-39P01597 117 aa11.34□□□□□ -0.59
CHD1-202ENST00000414220 IGKV1D-39P04432 117 aa11.34□□□□□ -0.59
CHD1-202ENST00000414220 REG1AP05451 166 aa11.34□□□□□ -0.59
CHD1-202ENST00000414220 OR5AC1P0C628 307 aa11.34□□□□□ -0.59
CHD1-202ENST00000414220 HOXD3P31249 432 aaPredicted RBP11.34□□□□□ -0.59
CHD1-202ENST00000414220 HSPE1P61604 102 aaKnown RBP11.34□□□□□ -0.59
CHD1-202ENST00000414220 ERHP84090 104 aaKnown RBP11.34□□□□□ -0.59
CHD1-202ENST00000414220 DCTN2Q13561 401 aaKnown RBP11.34□□□□□ -0.59
CHD1-202ENST00000414220 SLC25A24Q6NUK1 477 aa11.34□□□□□ -0.59
CHD1-202ENST00000414220 TRIM63Q969Q1 353 aa11.34□□□□□ -0.59
CHD1-202ENST00000414220 SRRQ9GZT4 340 aa11.34□□□□□ -0.59
CHD1-202ENST00000414220 TMEM222Q9H0R3 208 aa11.34□□□□□ -0.59
CHD1-202ENST00000414220 TMEM14BQ9NUH8 114 aa11.34□□□□□ -0.59
CHD1-202ENST00000414220 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.33□□□□□ -0.6
CHD1-202ENST00000414220 TRBV7-1A0A0A6YYK4 115 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 IGLC7A0M8Q6 106 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 CRYM-AS1A6NIL9 109 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 SAP30O75446 220 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 CDS2O95674 445 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 IFNA17P01571 189 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 AKR1C4P17516 323 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 SRPXP78539 464 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 EGFEM1PQ0D2K5 195 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 RBPMSQ93062 196 aaKnown RBP11.33□□□□□ -0.6
CHD1-202ENST00000414220 PLEKHA3Q9HB20 300 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 ENY2Q9NPA8 101 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 PEMTQ9UBM1 199 aa11.33□□□□□ -0.6
CHD1-202ENST00000414220 TNCP24821 2201 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 IGLV11-55A0A075B6I3 123 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 A0A1B0GW64 132 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 CGB1A6NKQ9 187 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 WIPF1O43516 503 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 GGCTO75223 188 aaKnown RBP11.32□□□□□ -0.6
CHD1-202ENST00000414220 PRCDQ00LT1 54 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 DEFA5Q01523 94 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 KLK9Q2XQG4 91 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 LINC00299Q6ZSB3 139 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 SLC35G3Q8N808 338 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 OR10W1Q8NGF6 305 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 MRAPQ8TCY5 172 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 IL22RA2Q969J5 263 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 GALNT14Q96FL9 552 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 FANCD2OSQ96PS1 177 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 KLK9Q9UKQ9 250 aa11.32□□□□□ -0.6
CHD1-202ENST00000414220 NOTCH3Q9UM47 2321 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms