RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 LINC00312Q9Y6C7 94 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 ZIC3O60481 467 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 GHRHP01286 108 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 BSPH1Q075Z2 132 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 LEMD1Q68G75 181 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 CYB5R2Q6BCY4 276 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 OR4D5Q8NGN0 318 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 KIF26AQ9ULI4 1882 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-204ENST00000395898 TRBV20OR9-2A0A075B6H5 130 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 PNKDQ8N490 385 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 FAM57AQ8TBR7 257 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 MARVELD3Q96A59 401 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 PRELID3AQ96N28 172 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 TLNRD1Q9H1K6 362 aa4.63□□□□□ -1.67
VPS13C-204ENST00000395898 KBTBD11-OT1A0A1B0GTJ5 212 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 IQCF6A8MYZ5 107 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 PRSS53Q2L4Q9 553 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 SLC25A34Q6PIV7 304 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 NEUROG1Q92886 237 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 ALKBH7Q9BT30 221 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-204ENST00000395898 ZNF98A6NK75 572 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 CEACAM4O75871 244 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 ZNF708P17019 499 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 C2orf68Q2NKX9 166 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 CENPWQ5EE01 88 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 PCNX1Q96RV3 2341 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 A0A1B0GW15 77 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 MYOD1P15172 320 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 PLP1P60201 277 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 LCN2P80188 198 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 PUSL1Q8N0Z8 303 aaKnown RBP4.62□□□□□ -1.67
VPS13C-204ENST00000395898 MTURNQ8N3F0 131 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 LEAP2Q969E1 77 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 FOXJ2Q9P0K8 574 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 TRGV3P03979 118 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 UCP1P25874 307 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 SRIP30626 198 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 HIST1H1AQ02539 215 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-204ENST00000395898 LY6EQ16553 131 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 TRAV9-1A0A075B6T8 112 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 SNRPCP09234 159 aaKnown RBP4.62□□□□□ -1.67
VPS13C-204ENST00000395898 GPHA2Q96T91 129 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 RLFQ13129 1914 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 H7C2G1 150 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 YPEL1O60688 119 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 TBR1Q16650 682 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 YPEL2Q96QA6 119 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 NPCDR1Q9BY65 106 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 ATP5LO75964 103 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 IMMP1LQ96LU5 166 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 RARRES2Q99969 163 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 PEMTQ9UBM1 199 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 TNFRSF18Q9Y5U5 241 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 IGKV1D-33P01593 117 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 IGKV1-33P01594 117 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 CECR9P0C854 216 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 PEAR1Q5VY43 1037 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-204ENST00000395898 FAM131CQ96AQ9 280 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 IGLV3-12A0A075B6K2 115 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 PAX1P15863 534 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 KLK2P20151 261 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 CDX1P47902 265 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-204ENST00000395898 ICAM4Q14773 271 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 MEIG1Q5JSS6 88 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 WDR82Q6UXN9 313 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 LINC00114Q6XXX2 140 aa4.62□□□□□ -1.67
VPS13C-204ENST00000395898 A0A1B0GUT8 65 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 DPRXA6NFQ7 191 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 C17orf100A8MU93 164 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 RFPL3SP0C7P2 107 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 TUBA4BQ9H853 241 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 H0YL77 283 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 CRYBA2P53672 197 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 AICDAQ9GZX7 198 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 IGKV3D-11A0A0A0MRZ8 115 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 EPOPA6NHQ4 379 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 CTSBP07858 339 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 GCHFRP30047 84 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 PLAURQ03405 335 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 TTC32Q5I0X7 151 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 FAM74A4Q5TZK3 123 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 ABHD17AQ96GS6 310 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 CACNA1EQ15878 2313 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 TMEM190Q8WZ59 177 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 ARPC1AQ92747 370 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 TGIF2-C20orf24A0A0A6YYL0 155 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 IGHV2OR16-5A0A0B4J2B6 119 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 PQLC2LA1A4F0 135 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 NPIPB9F8W1W9 429 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 SUMO2P61956 95 aaKnown RBP4.61□□□□□ -1.67
VPS13C-204ENST00000395898 PSG7Q13046 419 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 TCF23Q7RTU1 214 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 RNASE6Q93091 150 aaKnown RBP4.61□□□□□ -1.67
VPS13C-204ENST00000395898 DPH3Q96FX2 82 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 C7orf71A4D174 169 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 FAM27E3Q08E93 113 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 REC114Q7Z4M0 266 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 OR4X2Q8NGF9 303 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 DENND4AQ7Z401 1863 aa4.61□□□□□ -1.67
VPS13C-204ENST00000395898 NPIPB7O75200 414 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms