RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 MOB4Q9Y3A3 225 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 TEX50A0A1B0GTY4 177 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 H3BUX3 64 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 CNIH1O95406 144 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 CNTFRP26992 372 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 RPL12P30050 165 aaKnown RBP10.93□□□□□ -0.66
VAPB-202ENST00000395802 ERHP84090 104 aaKnown RBP10.93□□□□□ -0.66
VAPB-202ENST00000395802 KRTAP1-1Q07627 177 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 TNXAQ16473 311 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 DEFB112Q30KQ8 113 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 ZNF562Q6V9R5 426 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 RBMS3Q6XE24 437 aaKnown RBP10.93□□□□□ -0.66
VAPB-202ENST00000395802 STX12Q86Y82 276 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 SSMEM1Q8WWF3 244 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 SRSF8Q9BRL6 282 aaKnown RBP10.93□□□□□ -0.66
VAPB-202ENST00000395802 SLC25A33Q9BSK2 321 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 PRDM13Q9H4Q3 707 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 HEYLQ9NQ87 328 aaPredicted RBP10.93□□□□□ -0.66
VAPB-202ENST00000395802 PSENENQ9NZ42 101 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 NAV3Q8IVL0 2385 aa10.93□□□□□ -0.66
VAPB-202ENST00000395802 INS-IGF2F8WCM5 200 aa10.92□□□□□ -0.66
VAPB-202ENST00000395802 COMPP49747 757 aaPredicted RBP10.92□□□□□ -0.66
VAPB-202ENST00000395802 BAXQ07812 192 aa10.92□□□□□ -0.66
VAPB-202ENST00000395802 Q6YL49 198 aa10.92□□□□□ -0.66
VAPB-202ENST00000395802 ST8SIA2Q92186 375 aa10.92□□□□□ -0.66
VAPB-202ENST00000395802 HINT2Q9BX68 163 aa10.92□□□□□ -0.66
VAPB-202ENST00000395802 CYTL1Q9NRR1 136 aa10.92□□□□□ -0.66
VAPB-202ENST00000395802 NDUFA4L2Q9NRX3 87 aa10.92□□□□□ -0.66
VAPB-202ENST00000395802 TMEM50AO95807 157 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 IER3P46695 156 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 RPL27AP46776 148 aaKnown RBP10.91□□□□□ -0.66
VAPB-202ENST00000395802 UBA52P62987 128 aaKnown RBP10.91□□□□□ -0.66
VAPB-202ENST00000395802 PIFOQ8TCI5 191 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 TMUB1Q9BVT8 246 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 ZNF471Q9BX82 626 aaPredicted RBP10.91□□□□□ -0.66
VAPB-202ENST00000395802 UBQLN2Q9UHD9 624 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 CDC42EP3Q9UKI2 254 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 STRAPQ9Y3F4 350 aaKnown RBP10.91□□□□□ -0.66
VAPB-202ENST00000395802 CA2P00918 260 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 HLA-DRB1P01911 266 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 IAPPP10997 89 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 SNCAP37840 140 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 HTR2BP41595 481 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 SUB1P53999 127 aaKnown RBP eCLIP10.91□□□□□ -0.66
VAPB-202ENST00000395802 PAX9P55771 341 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 GNB1P62873 340 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 STOML3Q8TAV4 291 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 C22orf15Q8WYQ4 148 aa10.91□□□□□ -0.66
VAPB-202ENST00000395802 OTOGQ6ZRI0 2925 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 TLN2Q9Y4G6 2542 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 A6NDX4 124 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 TAAR5O14804 337 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 IFNA10P01566 189 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 OPN1MWP04001 364 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 OPN1MW2P0DN77 364 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 OPN1MW3P0DN78 364 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 RAB11AP62491 216 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 HBG1P69891 147 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 HBG2P69892 147 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 SPANXN5Q5MJ07 72 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 ALKAL2Q6UX46 152 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 BCL6BQ8N143 479 aaPredicted RBP10.9□□□□□ -0.66
VAPB-202ENST00000395802 TMEM86BQ8N661 226 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 Q8N9W7 124 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 TPSG1Q9NRR2 321 aa10.9□□□□□ -0.66
VAPB-202ENST00000395802 CELSR1Q9NYQ6 3014 aa10.89□□□□□ -0.67
VAPB-202ENST00000395802 ATP6V1G1O75348 118 aa10.89□□□□□ -0.67
VAPB-202ENST00000395802 TSPAN9O75954 239 aa10.89□□□□□ -0.67
VAPB-202ENST00000395802 SULT1A1P50225 295 aa10.89□□□□□ -0.67
VAPB-202ENST00000395802 PJVKQ0ZLH3 352 aa10.89□□□□□ -0.67
VAPB-202ENST00000395802 FXYD3Q14802 87 aa10.89□□□□□ -0.67
VAPB-202ENST00000395802 NDUFA5Q16718 116 aa10.89□□□□□ -0.67
VAPB-202ENST00000395802 TMEM252Q8N6L7 170 aa10.89□□□□□ -0.67
VAPB-202ENST00000395802 SCARB1Q8WTV0 552 aa10.89□□□□□ -0.67
VAPB-202ENST00000395802 SRSF12Q8WXF0 261 aaKnown RBP10.89□□□□□ -0.67
VAPB-202ENST00000395802 RBMXL1Q96E39 390 aaKnown RBP10.89□□□□□ -0.67
VAPB-202ENST00000395802 FBXL17Q9UF56 701 aa10.89□□□□□ -0.67
VAPB-202ENST00000395802 TNCP24821 2201 aa10.89□□□□□ -0.67
VAPB-202ENST00000395802 RPS10-NUDT3A0A1W2PQS6 291 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 IGSF23A1L1A6 192 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 VDAC2P45880 294 aaPredicted RBP10.88□□□□□ -0.67
VAPB-202ENST00000395802 EWSR1Q01844 656 aaKnown RBP eCLIP10.88□□□□□ -0.67
VAPB-202ENST00000395802 SPINK9Q5DT21 86 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 CLEC9AQ6UXN8 241 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 C5orf56Q8N8D9 126 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 SLC24A4Q8NFF2 622 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 ARPC1AQ92747 370 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 BSCL2Q96G97 398 aaPredicted RBP10.88□□□□□ -0.67
VAPB-202ENST00000395802 TMEM68Q96MH6 324 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 VPREB3Q9UKI3 123 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 ACANP16112 2415 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 FAM24AA6NFZ4 105 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 CYB5BO43169 146 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 LY6G6DO95868 133 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 OR8U8P0C7N1 319 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 NHLH2Q02577 135 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 LY6EQ16553 131 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 MRGPRG-AS1Q2M3A8 158 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 TMEM219Q86XT9 240 aa10.88□□□□□ -0.67
VAPB-202ENST00000395802 OR1L6Q8NGR2 347 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms