RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 FXYD3Q14802 87 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 MYO7BQ6PIF6 2116 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 MYOZ3Q8TDC0 251 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 ZNF407Q9C0G0 2248 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 MPDZO75970 2070 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 C17orf100A8MU93 164 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 SRIP30626 198 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 TFF3Q07654 80 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 RSPO3Q9BXY4 272 aaPredicted RBP16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 NPIPB11E5RHQ5 1161 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 HEATR1Q9H583 2144 aaKnown RBP16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 PCNX1Q96RV3 2341 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 TRAV9-1A0A075B6T8 112 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 LOC105371267A0A1B0GV96 52 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 HERVK_113P61574 105 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 Q1RN00 199 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 OR8A1Q8NGG7 326 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 METTL26Q96S19 204 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 ZFP30Q9Y2G7 519 aa16.4■□□□□ 0.22
TGFBR1-201ENST00000374990 ID1P41134 155 aa16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 DGAT2L7PQ6IED9 249 aa16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 RNASEH2CQ8TDP1 164 aaKnown RBP16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 LOC105371242A0A075B767 164 aa16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 ETV2O00321 342 aaPredicted RBP16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 CD5P06127 495 aa16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 COL25A1Q9BXS0 654 aaPredicted RBP16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 HEATR5AQ86XA9 2040 aa16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 ZNF25P17030 456 aaPredicted RBP16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 CSRP1P21291 193 aaKnown RBP16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 FOXL2NBQ6ZUU3 175 aa16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 DPM3Q9P2X0 92 aa16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 RABAC1Q9UI14 185 aa16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 NBEAP1P0C6P0 100 aa16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 PSG9Q00887 426 aa16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 MBD3L1Q8WWY6 194 aa16.39■□□□□ 0.21
TGFBR1-201ENST00000374990 PNKDQ8N490 385 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 UQCR10Q9UDW1 63 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 MAS1LP35410 378 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 CYTL1Q9NRR1 136 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 SCN8AQ9UQD0 1980 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 IGKV1-27A0A075B6S5 117 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 CBY3A6NI87 242 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 ICAM4Q14773 271 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 MRPL37Q9BZE1 423 aaKnown RBP16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 SCGB1C2P0DMR2 95 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 IGFBP2P18065 325 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 RELBQ01201 579 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 FAM201AQ5SY85 155 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 IGKV3-7A0A075B6H7 116 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 FAM90A9PA6NNJ1 464 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 LOXL3P58215 753 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 MORN2Q502X0 79 aa16.38■□□□□ 0.21
TGFBR1-201ENST00000374990 BMPERQ8N8U9 685 aa16.37■□□□□ 0.21
TGFBR1-201ENST00000374990 IL36BQ9NZH7 164 aa16.37■□□□□ 0.21
TGFBR1-201ENST00000374990 WDR83OSQ9Y284 106 aa16.37■□□□□ 0.21
TGFBR1-201ENST00000374990 CD59P13987 128 aa16.37■□□□□ 0.21
TGFBR1-201ENST00000374990 FOXG1P55316 489 aaPredicted RBP16.37■□□□□ 0.21
TGFBR1-201ENST00000374990 CKS2P33552 79 aa16.37■□□□□ 0.21
TGFBR1-201ENST00000374990 RBPMS2Q6ZRY4 209 aaKnown RBP16.37■□□□□ 0.21
TGFBR1-201ENST00000374990 REG1AP05451 166 aa16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 HOXA5P20719 270 aa16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 LINC00305Q7Z4B0 112 aa16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 ABCA4P78363 2273 aa16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 TAS2R60P59551 318 aa16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 SCGB1D4Q6XE38 83 aa16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 SRSF12Q8WXF0 261 aaKnown RBP16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 CGAP01215 116 aa16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 SAPCD1Q5SSQ6 148 aa16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 KIAA1644Q3SXP7 199 aa16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 FAM209BQ5JX69 171 aa16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 GUCD1Q96NT3 240 aa16.36■□□□□ 0.21
TGFBR1-201ENST00000374990 FOLR2P14207 255 aa16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 DUTP33316 252 aaKnown RBP16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 TRAV1-1A0A0B4J248 108 aa16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 CBLN1P23435 193 aa16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 RPL23P62829 140 aaKnown RBP16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 Q6ZS49 121 aa16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 TRBV6-6A0A0A6YYG2 114 aa16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 SRRM5B3KS81 715 aa16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 UPK2O00526 184 aa16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 KLRB1Q12918 225 aa16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 C15orf61A6NNL5 157 aa16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 SRSF3P84103 164 aaKnown RBP16.35■□□□□ 0.21
TGFBR1-201ENST00000374990 IGHV3-48P01763 117 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 TWIST1Q15672 202 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 NMSQ5H8A3 153 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 C12orf54Q6X4T0 127 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 OR10J6PQ8NGY7 276 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 PGLYRP4Q96LB8 373 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 C16orf92Q96LL3 132 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 BSPH1Q075Z2 132 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 SPRR3Q9UBC9 169 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 IL4P05112 153 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 GOLT1AQ6ZVE7 132 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 MYLKQ15746 1914 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 RPL13AP40429 203 aaKnown RBP16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 RTN4RL2Q86UN3 420 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 ABHD17AQ96GS6 310 aa16.34■□□□□ 0.21
TGFBR1-201ENST00000374990 MOSP00540 346 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms