RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 CENPWQ5EE01 88 aa9.96□□□□□ -0.81
DEPDC1-201ENST00000370966 ATRAIDQ6UW56 229 aa9.96□□□□□ -0.81
DEPDC1-201ENST00000370966 GSN-AS1Q9NRJ2 163 aa9.96□□□□□ -0.81
DEPDC1-201ENST00000370966 TSC2P49815 1807 aa9.96□□□□□ -0.82
DEPDC1-201ENST00000370966 GUCD1Q96NT3 240 aa9.96□□□□□ -0.82
DEPDC1-201ENST00000370966 ZFP30Q9Y2G7 519 aa9.96□□□□□ -0.82
DEPDC1-201ENST00000370966 DOCK8Q8NF50 2099 aa9.96□□□□□ -0.82
DEPDC1-201ENST00000370966 A6NDN8 102 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 CD59P13987 128 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 EGR1P18146 543 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 RPL13AP40429 203 aaKnown RBP9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 FAM201AQ5SY85 155 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 OR4D5Q8NGN0 318 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 J3KRW8 73 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 RPLP1P05386 114 aaKnown RBP9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 PF4V1P10720 104 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 OTX1P32242 354 aaPredicted RBP9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 TMEM144Q7Z5S9 345 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 OR10J6PQ8NGY7 276 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 ABHD17AQ96GS6 310 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 C16orf92Q96LL3 132 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 SDF2L1Q9HCN8 221 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 FOXH1O75593 365 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 LEPROTL1O95214 131 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 REG1AP05451 166 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 MAS1LP35410 378 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 COL5A1-AS1Q5SY13 56 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 SCGB1D4Q6XE38 83 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 RNASEH2CQ8TDP1 164 aaKnown RBP9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 PNRC2Q9NPJ4 139 aaKnown RBP9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 PKDREJQ9NTG1 2253 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 NBEAP1P0C6P0 100 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 CKS2P33552 79 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 RELBQ01201 579 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 TFF3Q07654 80 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 TWIST1Q15672 202 aa9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 ZNF324BQ6AW86 544 aaPredicted RBP9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 COL25A1Q9BXS0 654 aaPredicted RBP9.95□□□□□ -0.82
DEPDC1-201ENST00000370966 GFRA3O60609 400 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 SRIP30626 198 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 SUPT4H1P63272 117 aaKnown RBP9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 BSPH1Q075Z2 132 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 FHL1Q13642 323 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 ZNF385CQ66K41 422 aaPredicted RBP9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 DOPEY2Q9Y3R5 2298 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 TMEM42Q69YG0 159 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 LINC00305Q7Z4B0 112 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 TMEM183AQ8IXX5 376 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 NEU4Q8WWR8 484 aaPredicted RBP9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 MGPP08493 103 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 IGFBP2P18065 325 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 MORN2Q502X0 79 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 RTN4RL2Q86UN3 420 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 LINC01560Q8TB33 94 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 SRSF12Q8WXF0 261 aaKnown RBP9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 CLDN16Q9Y5I7 305 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 DMRT1Q9Y5R6 373 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 E9PQ18 207 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 SAPCD1Q5SSQ6 148 aa9.94□□□□□ -0.82
DEPDC1-201ENST00000370966 ABCA1O95477 2261 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 SCN8AQ9UQD0 1980 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 TRAV9-1A0A075B6T8 112 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 DDTP30046 118 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 SPRR3Q9UBC9 169 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 PHF3Q92576 2039 aaKnown RBP9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 CREBBPQ92793 2442 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 FAM90A9PA6NNJ1 464 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 NAPSAO96009 420 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 IGHV3-48P01763 117 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 IL4P05112 153 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 CFPP27918 469 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 BMPERQ8N8U9 685 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 PGLYRP4Q96LB8 373 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 COL6A6A6NMZ7 2263 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 FOXG1P55316 489 aaPredicted RBP9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 UQCR10Q9UDW1 63 aa9.93□□□□□ -0.82
DEPDC1-201ENST00000370966 MOSP00540 346 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 CGAP01215 116 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 QRFPP83859 136 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 PEAR1Q5VY43 1037 aaPredicted RBP9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 GOLT1AQ6ZVE7 132 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 ARL6IP6Q8N6S5 226 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 DYNLRB2Q8TF09 96 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 IL36BQ9NZH7 164 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 MYO7BQ6PIF6 2116 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 HEATR1Q9H583 2144 aaKnown RBP9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 IGKV1-27A0A075B6S5 117 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 UPK2O00526 184 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 TCF21O43680 179 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 FOXL2NBQ6ZUU3 175 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 TCF24Q7RTU0 167 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 WFDC3Q8IUB2 231 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 TEX29Q8N6K0 151 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 PIMREGQ9BSJ6 248 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 MRPL20Q9BYC9 149 aaKnown RBP9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 C15orf61A6NNL5 157 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 FOLR2P14207 255 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 PDLIM4P50479 330 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 TAS2R60P59551 318 aa9.92□□□□□ -0.82
DEPDC1-201ENST00000370966 KIAA1644Q3SXP7 199 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms