RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 PNKDQ8N490 385 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 C9orf106Q8NAJ2 232 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 RBFOX2O43251 390 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 IGHV3-48P01763 117 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 FOLR2P14207 255 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 RPL24P83731 157 aaKnown RBP14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 C12orf54Q6X4T0 127 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 KLHDC3Q9BQ90 382 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 LINC00312Q9Y6C7 94 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 NBEAP1P0C6P0 100 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 SPATA45Q537H7 98 aa14.37□□□□□ -0.11
TRAPPC11-201ENST00000334690 CBLN1P23435 193 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 OR4D5Q8NGN0 318 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 ATG101Q9BSB4 218 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 TCF20Q9UGU0 1960 aaKnown RBP14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 PF4V1P10720 104 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 LINC00305Q7Z4B0 112 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 ZNF738Q8NE65 137 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 GRIFINA4D1Z8 144 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 IGFBP2P18065 325 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 SUPT4H1P63272 117 aaKnown RBP14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 PKDREJQ9NTG1 2253 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 CGAP01215 116 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 FAM201AQ5SY85 155 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 TMEM144Q7Z5S9 345 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 GGNQ86UU5 652 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 ELOVL1Q9BW60 279 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 IL36BQ9NZH7 164 aa14.36□□□□□ -0.11
TRAPPC11-201ENST00000334690 LOC105371267A0A1B0GV96 52 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 DLX1P56177 255 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 GOLT1AQ6ZVE7 132 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 FAM57AQ8TBR7 257 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 SCN8AQ9UQD0 1980 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 CEACAM1P13688 526 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 GFRA1P56159 465 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 DPM3Q9P2X0 92 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 IL4P05112 153 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 SAPCD1Q5SSQ6 148 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 WDR82Q6UXN9 313 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 TCF24Q7RTU0 167 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 FGFBP3Q8TAT2 258 aa14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 RNASEH2CQ8TDP1 164 aaKnown RBP14.35□□□□□ -0.11
TRAPPC11-201ENST00000334690 TRAV9-1A0A075B6T8 112 aa14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 MOSP00540 346 aa14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 WFDC3Q8IUB2 231 aa14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 SSBP3Q9BWW4 388 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 C17orf100A8MU93 164 aa14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 NMUP48645 174 aa14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 ICAM4Q14773 271 aa14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 OR10AG1Q8NH19 301 aa14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 SGK494Q96LW2 274 aa14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 HTN1P15515 57 aa14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 PEAR1Q5VY43 1037 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 ZNF324BQ6AW86 544 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC11-201ENST00000334690 HBBP68871 147 aa14.33□□□□□ -0.11
TRAPPC11-201ENST00000334690 H3BTX0 84 aa14.33□□□□□ -0.12
TRAPPC11-201ENST00000334690 HOXA5P20719 270 aa14.33□□□□□ -0.12
TRAPPC11-201ENST00000334690 MAP1LC3AQ9H492 121 aa14.33□□□□□ -0.12
TRAPPC11-201ENST00000334690 CIDEAO60543 219 aa14.33□□□□□ -0.12
TRAPPC11-201ENST00000334690 HLA-DRB1P01911 266 aa14.33□□□□□ -0.12
TRAPPC11-201ENST00000334690 ATP5G3P48201 142 aa14.33□□□□□ -0.12
TRAPPC11-201ENST00000334690 PINLYPA6NC86 204 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 TM4SF20Q53R12 229 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 MPDZO75970 2070 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 TAS2R60P59551 318 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 RPL23P62829 140 aaKnown RBP14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 COTL1Q14019 142 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 SLC25A34Q6PIV7 304 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 DYNLRB2Q8TF09 96 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 AP5S1Q9NUS5 200 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 PSMB2P49721 201 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 MORN2Q502X0 79 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 EBLN2Q6P2I7 272 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 TMEM105Q8N8V8 129 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 SCO2A0A1W2PP80 73 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 K7ERU9 68 aa14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 SRSF3P84103 164 aaKnown RBP14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 PNRC2Q9NPJ4 139 aaKnown RBP14.32□□□□□ -0.12
TRAPPC11-201ENST00000334690 ANOS1P23352 680 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 ZNF841Q6ZN19 808 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 CD5P06127 495 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 BTF3P20290 206 aaKnown RBP14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 OTX1P32242 354 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 BSPH1Q075Z2 132 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 MBD3L1Q8WWY6 194 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 PHF3Q92576 2039 aaKnown RBP14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 PEX7O00628 323 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 FOXH1O75593 365 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 EAF1Q96JC9 268 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 TMEM70Q9BUB7 260 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 MRPL20Q9BYC9 149 aaKnown RBP14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 FBXL15Q9H469 300 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 WDR83OSQ9Y284 106 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 NAPSAO96009 420 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 NPPCP23582 126 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 C2orf83Q53S99 150 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 KIAA2026Q5HYC2 2103 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 NEU1Q99519 415 aa14.31□□□□□ -0.12
TRAPPC11-201ENST00000334690 UPK2O00526 184 aa14.3□□□□□ -0.12
TRAPPC11-201ENST00000334690 KLRB1Q12918 225 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms