RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 PRSS46E5RG02 174 aa16.34■□□□□ 0.21
CRLF3-201ENST00000324238 CXorf1O96002 111 aa16.34■□□□□ 0.21
CRLF3-201ENST00000324238 LINC00310P59036 64 aa16.34■□□□□ 0.21
CRLF3-201ENST00000324238 LCN2P80188 198 aa16.34■□□□□ 0.21
CRLF3-201ENST00000324238 Q6ZWC4 215 aa16.34■□□□□ 0.21
CRLF3-201ENST00000324238 NHLRC2Q8NBF2 726 aa16.34■□□□□ 0.21
CRLF3-201ENST00000324238 RNASE7Q9H1E1 156 aaKnown RBP16.34■□□□□ 0.21
CRLF3-201ENST00000324238 ADH4P08319 380 aa16.33■□□□□ 0.21
CRLF3-201ENST00000324238 SSTP61278 116 aa16.33■□□□□ 0.21
CRLF3-201ENST00000324238 CT45A1Q5HYN5 189 aa16.33■□□□□ 0.21
CRLF3-201ENST00000324238 CT45A3Q8NHU0 189 aa16.33■□□□□ 0.21
CRLF3-201ENST00000324238 PRR7Q8TB68 274 aa16.33■□□□□ 0.21
CRLF3-201ENST00000324238 MRPL18Q9H0U6 180 aaKnown RBP16.33■□□□□ 0.21
CRLF3-201ENST00000324238 GCM1Q9NP62 436 aa16.33■□□□□ 0.21
CRLF3-201ENST00000324238 RYDENQ9NUL5 291 aaKnown RBP16.33■□□□□ 0.21
CRLF3-201ENST00000324238 PAM16Q9Y3D7 125 aa16.33■□□□□ 0.21
CRLF3-201ENST00000324238 CRYBB3P26998 211 aa16.33■□□□□ 0.2
CRLF3-201ENST00000324238 ERVFC1-1P60608 527 aa16.33■□□□□ 0.2
CRLF3-201ENST00000324238 OR8I2Q8N0Y5 310 aa16.33■□□□□ 0.2
CRLF3-201ENST00000324238 HSPB9Q9BQS6 159 aa16.33■□□□□ 0.2
CRLF3-201ENST00000324238 DCAF16Q9NXF7 216 aa16.33■□□□□ 0.2
CRLF3-201ENST00000324238 RNF114Q9Y508 228 aa16.33■□□□□ 0.2
CRLF3-201ENST00000324238 SAA2-SAA4A0A096LPE2 208 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 A6NNC1 897 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 FCN1O00602 326 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 MMP23AO75900 390 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 SAA2P0DJI9 122 aaPredicted RBP16.32■□□□□ 0.2
CRLF3-201ENST00000324238 BATFQ16520 125 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 OR4A47Q6IF82 309 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 FAM90A1Q86YD7 464 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 RND1Q92730 232 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 J3QW42 95 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 FOXL1Q12952 345 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 PSG5Q15238 335 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 OR1L6Q8NGR2 347 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 FTH1P19P0C7X4 201 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 NPY1RP25929 384 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 RAB4BP61018 213 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 HTD2P86397 168 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 BAGE3Q86Y29 109 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 BAGE2Q86Y30 109 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 VN1R17PQ8TDU5 208 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 NPVFQ9HCQ7 196 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 CALYQ9NYX4 217 aa16.32■□□□□ 0.2
CRLF3-201ENST00000324238 CSMD1Q96PZ7 3565 aa16.31■□□□□ 0.2
CRLF3-201ENST00000324238 CA1P00915 261 aaPredicted RBP16.31■□□□□ 0.2
CRLF3-201ENST00000324238 CCKARP32238 428 aa16.31■□□□□ 0.2
CRLF3-201ENST00000324238 LHFPL4Q7Z7J7 247 aa16.31■□□□□ 0.2
CRLF3-201ENST00000324238 SNURFLB1AK76 121 aa16.31■□□□□ 0.2
CRLF3-201ENST00000324238 TEPPQ6URK8 271 aa16.31■□□□□ 0.2
CRLF3-201ENST00000324238 ZCCHC24Q8N2G6 241 aaKnown RBP16.31■□□□□ 0.2
CRLF3-201ENST00000324238 SLC24A4Q8NFF2 622 aa16.31■□□□□ 0.2
CRLF3-201ENST00000324238 ITLN1Q8WWA0 313 aa16.31■□□□□ 0.2
CRLF3-201ENST00000324238 IGKV1-16P04430 117 aa16.3■□□□□ 0.2
CRLF3-201ENST00000324238 CRISP2P16562 243 aa16.3■□□□□ 0.2
CRLF3-201ENST00000324238 PQLC2Q6ZP29 291 aa16.3■□□□□ 0.2
CRLF3-201ENST00000324238 ST6GALNAC3Q8NDV1 305 aa16.3■□□□□ 0.2
CRLF3-201ENST00000324238 RAB1CQ92928 201 aa16.3■□□□□ 0.2
CRLF3-201ENST00000324238 SH3BGRL2Q9UJC5 107 aa16.3■□□□□ 0.2
CRLF3-201ENST00000324238 TP53TG5Q9Y2B4 290 aa16.3■□□□□ 0.2
CRLF3-201ENST00000324238 LRBAP50851 2863 aa16.3■□□□□ 0.2
CRLF3-201ENST00000324238 ZGRF1Q86YA3 2104 aa16.3■□□□□ 0.2
CRLF3-201ENST00000324238 STARD4Q96DR4 205 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 LSM4Q9Y4Z0 139 aaKnown RBP16.29■□□□□ 0.2
CRLF3-201ENST00000324238 IGKV1OR2-108A0A075B7D4 117 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 OR7C2O60412 319 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 NUTF2P61970 127 aaKnown RBP16.29■□□□□ 0.2
CRLF3-201ENST00000324238 RPP30P78346 268 aaKnown RBP16.29■□□□□ 0.2
CRLF3-201ENST00000324238 OR10W1Q8NGF6 305 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 LINC00479Q96M42 142 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 PARD6AQ9NPB6 346 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 SRRM5B3KS81 715 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 MGST3O14880 152 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 C22orf34Q6ZV56 151 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 MMD2Q8IY49 270 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 ENY2Q9NPA8 101 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 DKK4Q9UBT3 224 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 PROCRQ9UNN8 238 aa16.29■□□□□ 0.2
CRLF3-201ENST00000324238 TNFSF13O75888 250 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 CENPWQ5EE01 88 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 TCTEX1D1Q8N7M0 179 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 SAMD10Q9BYL1 202 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 TRAV5A0A0B4J249 113 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 SRRM4A7MD48 611 aaKnown RBP16.28■□□□□ 0.2
CRLF3-201ENST00000324238 CD99P14209 185 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 RHOBP62745 196 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 C17orf58Q2M2W7 97 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 MRPL54Q6P161 138 aaKnown RBP16.28■□□□□ 0.2
CRLF3-201ENST00000324238 OR9G1Q8NH87 305 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 EAF1Q96JC9 268 aaPredicted RBP16.28■□□□□ 0.2
CRLF3-201ENST00000324238 CCL13Q99616 98 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 SERTAD4Q9NUC0 356 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 JPT1Q9UK76 154 aa16.28■□□□□ 0.2
CRLF3-201ENST00000324238 MGST1P10620 155 aaKnown RBP16.27■□□□□ 0.2
CRLF3-201ENST00000324238 MRPS11P82912 194 aaKnown RBP16.27■□□□□ 0.2
CRLF3-201ENST00000324238 BHLHA15Q7RTS1 189 aaPredicted RBP16.27■□□□□ 0.2
CRLF3-201ENST00000324238 FAM216BQ8N7L0 139 aa16.27■□□□□ 0.2
CRLF3-201ENST00000324238 ZCCHC14Q8WYQ9 949 aaKnown RBP16.27■□□□□ 0.2
CRLF3-201ENST00000324238 SARAFQ96BY9 339 aa16.27■□□□□ 0.2
CRLF3-201ENST00000324238 YPEL1O60688 119 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms