RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SSX8Q7RTT4 187 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 OR1P1Q8NH06 330 aa13.83□□□□□ -0.2
CLIP4-201ENST00000320081 LSM10Q969L4 123 aaKnown RBP13.83□□□□□ -0.2
CLIP4-201ENST00000320081 C1QTNF9P0C862 333 aa13.82□□□□□ -0.2
CLIP4-201ENST00000320081 TFPI2P48307 235 aa13.82□□□□□ -0.2
CLIP4-201ENST00000320081 RNFT1Q5M7Z0 435 aa13.82□□□□□ -0.2
CLIP4-201ENST00000320081 PRSS1P07477 247 aa13.82□□□□□ -0.2
CLIP4-201ENST00000320081 SRIP30626 198 aa13.82□□□□□ -0.2
CLIP4-201ENST00000320081 CEACAM3P40198 252 aa13.82□□□□□ -0.2
CLIP4-201ENST00000320081 RPL30P62888 115 aaKnown RBP13.82□□□□□ -0.2
CLIP4-201ENST00000320081 LEMD1Q68G75 181 aa13.82□□□□□ -0.2
CLIP4-201ENST00000320081 IDI2-AS1Q9NZ38 188 aa13.82□□□□□ -0.2
CLIP4-201ENST00000320081 APCSP02743 223 aa13.82□□□□□ -0.2
CLIP4-201ENST00000320081 FCGR2BP31994 310 aaPredicted RBP13.82□□□□□ -0.2
CLIP4-201ENST00000320081 WDR82Q6UXN9 313 aa13.82□□□□□ -0.2
CLIP4-201ENST00000320081 C18orf12Q96KH6 178 aa13.82□□□□□ -0.2
CLIP4-201ENST00000320081 GOSR1O95249 250 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 CD59P13987 128 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 OR4A47Q6IF82 309 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 PNKDQ8N490 385 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 PGLYRP4Q96LB8 373 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 MRPL18Q9H0U6 180 aaKnown RBP13.81□□□□□ -0.2
CLIP4-201ENST00000320081 LIME1Q9H400 295 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 FBXL15Q9H469 300 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 SELENOKQ9Y6D0 94 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 USP9XQ93008 2570 aaPredicted RBP13.81□□□□□ -0.2
CLIP4-201ENST00000320081 F2RL2O00254 374 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 THYN1Q9P016 225 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 GLRXP35754 106 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 CDX1P47902 265 aaPredicted RBP13.81□□□□□ -0.2
CLIP4-201ENST00000320081 ID3Q02535 119 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 LRRC75BQ2VPJ9 315 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 Q6ZRM9 215 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 CLDND2Q8NHS1 167 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 PERPQ96FX8 193 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 AMMECR1Q9Y4X0 333 aaPredicted RBP13.81□□□□□ -0.2
CLIP4-201ENST00000320081 ADCYAP1P18509 176 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 BSPH1Q075Z2 132 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 CENPWQ5EE01 88 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 SLC35E4Q6ICL7 350 aa13.81□□□□□ -0.2
CLIP4-201ENST00000320081 SORL1Q92673 2214 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 IGHV3-66A0A0C4DH42 116 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 M0R143 59 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 SOD3P08294 240 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 IL6RP08887 468 aaPredicted RBP13.8□□□□□ -0.2
CLIP4-201ENST00000320081 ICAM4Q14773 271 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 ZNF506Q5JVG8 444 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 PCSK4Q6UW60 755 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 BMPERQ8N8U9 685 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 ZNF596Q8TC21 504 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 SMDT1Q9H4I9 107 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 NDUFA2O43678 99 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 GCHFRP30047 84 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 S100A7P31151 101 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 JPT1Q9UK76 154 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 TICRRQ7Z2Z1 1910 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 FBLL1A6NHQ2 334 aaKnown RBP13.8□□□□□ -0.2
CLIP4-201ENST00000320081 FGF16O43320 207 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 LGALS7P47929 136 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 GFRA1P56159 465 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 MIR17HGQ75NE6 70 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 MMD2Q8IY49 270 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 DNAJC4Q9NNZ3 241 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 ZDHHC8Q9ULC8 765 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 TMEM56-RWDD3S4R434 201 aa13.8□□□□□ -0.2
CLIP4-201ENST00000320081 CD33P20138 364 aa13.79□□□□□ -0.2
CLIP4-201ENST00000320081 GPR6P46095 362 aaPredicted RBP13.79□□□□□ -0.2
CLIP4-201ENST00000320081 ELOBQ15370 118 aa13.79□□□□□ -0.2
CLIP4-201ENST00000320081 PPIAL4CA0A0B4J2A2 164 aa13.79□□□□□ -0.2
CLIP4-201ENST00000320081 ZNF207O43670 478 aaKnown RBP13.79□□□□□ -0.2
CLIP4-201ENST00000320081 PPIAL4GP0DN37 164 aa13.79□□□□□ -0.2
CLIP4-201ENST00000320081 WDR73Q6P4I2 378 aa13.79□□□□□ -0.2
CLIP4-201ENST00000320081 ZNF788Q6ZQV5 615 aa13.79□□□□□ -0.2
CLIP4-201ENST00000320081 MRPL37Q9BZE1 423 aaKnown RBP13.79□□□□□ -0.2
CLIP4-201ENST00000320081 CRIM1Q9NZV1 1036 aa13.79□□□□□ -0.2
CLIP4-201ENST00000320081 ZNRD1Q9P1U0 126 aa13.79□□□□□ -0.2
CLIP4-201ENST00000320081 PRUNE2Q8WUY3 3088 aa13.79□□□□□ -0.2
CLIP4-201ENST00000320081 FAM19A2Q8N3H0 131 aa13.79□□□□□ -0.2
CLIP4-201ENST00000320081 MRPL20Q9BYC9 149 aaKnown RBP13.79□□□□□ -0.2
CLIP4-201ENST00000320081 PLSCR2Q9NRY7 297 aa13.79□□□□□ -0.2
CLIP4-201ENST00000320081 WIPF3A6NGB9 483 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 CA1P00915 261 aaPredicted RBP13.78□□□□□ -0.2
CLIP4-201ENST00000320081 CD82P27701 267 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 OR10W1Q8NGF6 305 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 TMEM177Q53S58 311 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 TCTEX1D1Q8N7M0 179 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 ATG101Q9BSB4 218 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 RABAC1Q9UI14 185 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 OR9G9P0C7N8 305 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 C8orf88P0DMB2 117 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 GOLT1AQ6ZVE7 132 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 P2RX4Q99571 388 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 WNT10AQ9GZT5 417 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 TANC1Q9C0D5 1861 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 FAM90A26D6RGX4 464 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 CSRP2Q16527 193 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 GCSAMQ8N6F7 178 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 OR4C5Q8NGB2 326 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 OR4D5Q8NGN0 318 aa13.78□□□□□ -0.2
CLIP4-201ENST00000320081 LOXL4Q96JB6 756 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms