RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 EP300Q09472 2414 aaPredicted RBP19.47■□□□□ 0.71
TARBP1-201ENST00000040877 PMCHL1Q16048 86 aa19.47■□□□□ 0.71
TARBP1-201ENST00000040877 MRPL18Q9H0U6 180 aaKnown RBP19.47■□□□□ 0.71
TARBP1-201ENST00000040877 RPRMQ9NS64 109 aa19.47■□□□□ 0.71
TARBP1-201ENST00000040877 C2orf83Q53S99 150 aa19.47■□□□□ 0.71
TARBP1-201ENST00000040877 WDR82Q6UXN9 313 aa19.47■□□□□ 0.71
TARBP1-201ENST00000040877 RCC1LQ96I51 464 aaKnown RBP19.47■□□□□ 0.71
TARBP1-201ENST00000040877 RARRES2Q99969 163 aa19.47■□□□□ 0.71
TARBP1-201ENST00000040877 PCP4P48539 62 aa19.46■□□□□ 0.71
TARBP1-201ENST00000040877 NUTF2P61970 127 aaKnown RBP19.46■□□□□ 0.71
TARBP1-201ENST00000040877 FAM89BQ8N5H3 189 aa19.46■□□□□ 0.71
TARBP1-201ENST00000040877 NEUROG3Q9Y4Z2 214 aa19.46■□□□□ 0.71
TARBP1-201ENST00000040877 WDR25Q64LD2 544 aaPredicted RBP19.46■□□□□ 0.71
TARBP1-201ENST00000040877 TGIF2-C20orf24A0A0A6YYL0 155 aa19.46■□□□□ 0.71
TARBP1-201ENST00000040877 PROB1E7EW31 1015 aa19.46■□□□□ 0.71
TARBP1-201ENST00000040877 PLPPR1Q8TBJ4 325 aa19.46■□□□□ 0.71
TARBP1-201ENST00000040877 NBEAP1P0C6P0 100 aa19.46■□□□□ 0.71
TARBP1-201ENST00000040877 RNF224P0DH78 156 aa19.46■□□□□ 0.71
TARBP1-201ENST00000040877 FAM131CQ96AQ9 280 aa19.46■□□□□ 0.71
TARBP1-201ENST00000040877 RBFOX2O43251 390 aaKnown RBP eCLIP19.45■□□□□ 0.7
TARBP1-201ENST00000040877 FAM159AQ6UWV7 190 aa19.45■□□□□ 0.7
TARBP1-201ENST00000040877 NYNRINQ9P2P1 1898 aaKnown RBP19.45■□□□□ 0.7
TARBP1-201ENST00000040877 PINLYPA6NC86 204 aa19.45■□□□□ 0.7
TARBP1-201ENST00000040877 J3QRE1 110 aa19.45■□□□□ 0.7
TARBP1-201ENST00000040877 DOCK4Q8N1I0 1966 aa19.45■□□□□ 0.7
TARBP1-201ENST00000040877 IGHV3OR16-12A0A075B7B8 117 aa19.45■□□□□ 0.7
TARBP1-201ENST00000040877 RRHO14718 337 aa19.45■□□□□ 0.7
TARBP1-201ENST00000040877 ZNF497Q6ZNH5 498 aa19.45■□□□□ 0.7
TARBP1-201ENST00000040877 LEPROTL1O95214 131 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 CRYGSP22914 178 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 TMEM238LA0A1B0GVL6 79 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 A6NJY4 79 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 PAPPA-AS1Q5QFB9 102 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 OR4X2Q8NGF9 303 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 LYZL4Q96KX0 146 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 DICER1Q9UPY3 1922 aaKnown RBP19.44■□□□□ 0.7
TARBP1-201ENST00000040877 IGHV1-18A0A0C4DH31 117 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 ZNF502Q8TBZ5 544 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 SFRP2Q96HF1 295 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 TMEM70Q9BUB7 260 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 PLSCR4Q9NRQ2 329 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 IGKV1-9A0A0C4DH69 117 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 ZNF318Q5VUA4 2279 aa19.44■□□□□ 0.7
TARBP1-201ENST00000040877 A1L4Q6 167 aa19.43■□□□□ 0.7
TARBP1-201ENST00000040877 TMEM133Q9H2Q1 129 aa19.43■□□□□ 0.7
TARBP1-201ENST00000040877 CRXO43186 299 aaPredicted RBP19.43■□□□□ 0.7
TARBP1-201ENST00000040877 HIST1H1AQ02539 215 aaPredicted RBP19.43■□□□□ 0.7
TARBP1-201ENST00000040877 REC114Q7Z4M0 266 aa19.43■□□□□ 0.7
TARBP1-201ENST00000040877 GPR82Q96P67 336 aa19.43■□□□□ 0.7
TARBP1-201ENST00000040877 NUP37Q8NFH4 326 aa19.43■□□□□ 0.7
TARBP1-201ENST00000040877 TNFRSF14Q92956 283 aa19.43■□□□□ 0.7
TARBP1-201ENST00000040877 FBLL1A6NHQ2 334 aaKnown RBP19.43■□□□□ 0.7
TARBP1-201ENST00000040877 SCN5AQ14524 2016 aa19.43■□□□□ 0.7
TARBP1-201ENST00000040877 NBR2O15453 112 aa19.42■□□□□ 0.7
TARBP1-201ENST00000040877 IGHV3-48P01763 117 aa19.42■□□□□ 0.7
TARBP1-201ENST00000040877 THBDP07204 575 aa19.42■□□□□ 0.7
TARBP1-201ENST00000040877 CENPWQ5EE01 88 aa19.42■□□□□ 0.7
TARBP1-201ENST00000040877 GGNQ86UU5 652 aa19.42■□□□□ 0.7
TARBP1-201ENST00000040877 NUDT3O95989 172 aa19.42■□□□□ 0.7
TARBP1-201ENST00000040877 TGFAP01135 160 aa19.42■□□□□ 0.7
TARBP1-201ENST00000040877 ZNF418Q8TF45 676 aaPredicted RBP19.42■□□□□ 0.7
TARBP1-201ENST00000040877 SMAD7O15105 426 aaKnown RBP19.42■□□□□ 0.7
TARBP1-201ENST00000040877 ZNF324O75467 553 aaPredicted RBP19.42■□□□□ 0.7
TARBP1-201ENST00000040877 HINT1P49773 126 aaPredicted RBP19.42■□□□□ 0.7
TARBP1-201ENST00000040877 ZP1P60852 638 aa19.42■□□□□ 0.7
TARBP1-201ENST00000040877 ICAM4Q14773 271 aa19.42■□□□□ 0.7
TARBP1-201ENST00000040877 HERPUD1Q15011 391 aa19.42■□□□□ 0.7
TARBP1-201ENST00000040877 SLC25A28Q96A46 364 aa19.42■□□□□ 0.7
TARBP1-201ENST00000040877 UPK2O00526 184 aa19.41■□□□□ 0.7
TARBP1-201ENST00000040877 MPZP25189 248 aa19.41■□□□□ 0.7
TARBP1-201ENST00000040877 NMUP48645 174 aa19.41■□□□□ 0.7
TARBP1-201ENST00000040877 OR10AG1Q8NH19 301 aa19.41■□□□□ 0.7
TARBP1-201ENST00000040877 A8MXK9 166 aa19.41■□□□□ 0.7
TARBP1-201ENST00000040877 KIR2DL4Q99706 377 aa19.41■□□□□ 0.7
TARBP1-201ENST00000040877 FOXA2Q9Y261 457 aaPredicted RBP19.41■□□□□ 0.7
TARBP1-201ENST00000040877 SDK2Q58EX2 2172 aa19.41■□□□□ 0.7
TARBP1-201ENST00000040877 IGFBP2P18065 325 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 SPATA45Q537H7 98 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 TEX45Q8NA69 505 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 SAA2-SAA4A0A096LPE2 208 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 H3BTX0 84 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 SAA2P0DJI9 122 aaPredicted RBP19.4■□□□□ 0.7
TARBP1-201ENST00000040877 MORN2Q502X0 79 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 GSN-AS1Q9NRJ2 163 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 RALGAPA1Q6GYQ0 2036 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 OR4C46A6NHA9 309 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 FOXI3A8MTJ6 420 aaPredicted RBP19.4■□□□□ 0.7
TARBP1-201ENST00000040877 MST1P26927 711 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 FHITP49789 147 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 SRSF7Q16629 238 aaKnown RBP eCLIP19.4■□□□□ 0.7
TARBP1-201ENST00000040877 TMEM144Q7Z5S9 345 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 NPFFR1Q9GZQ6 430 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 CDKN1AP38936 164 aa19.4■□□□□ 0.7
TARBP1-201ENST00000040877 IGHV3-35A0A0C4DH35 117 aa19.39■□□□□ 0.7
TARBP1-201ENST00000040877 FAM181BA6NEQ2 426 aa19.39■□□□□ 0.7
TARBP1-201ENST00000040877 PPP1R17O96001 155 aa19.39■□□□□ 0.69
TARBP1-201ENST00000040877 MBNL2Q5VZF2 373 aaKnown RBP19.39■□□□□ 0.69
TARBP1-201ENST00000040877 OR10S1Q8NGN2 331 aa19.39■□□□□ 0.69
TARBP1-201ENST00000040877 FAM90A9PA6NNJ1 464 aa19.39■□□□□ 0.69
TARBP1-201ENST00000040877 CCL3L1P16619 93 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms