RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 BB287469Q3UT53 144 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Slc25a35Q5SWT3 300 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1204Q7TR10 309 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 2410004P03RikA0A087WQY2 205 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Trbv29A0A0G2LB96 114 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm12887B1AVM1 119 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 P01798 113 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Igh-3P01867 404 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 GzmbP04187 247 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Zfp36l1P23950 338 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Lef1P27782 397 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Btg2Q04211 158 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Kazald1Q8BJ66 313 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1392Q8VFA6 311 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Shisal2bQ9D1Y9 158 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm9817Q9D2M0 144 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Hils1Q9QYL0 170 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 NgfrQ9Z0W1 417 aa11.51□□□□□ -0.57
Nup88-201ENSMUST00000035283 Trav15-2-dv6-2A0A075B650 123 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm4175D3YTW8 314 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm20403G3UYB0 123 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Vmn1r114L7N226 321 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Vmn1r126L7N2C8 321 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Ninj1O70131 152 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 GzmaP11032 260 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Foxa2P35583 459 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 CtrcQ3SYP2 268 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm9Q3UKW5 162 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1028Q7TR89 324 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Tubg2Q8VCK3 451 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr786Q8VFH8 312 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1444Q8VFX2 319 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Uqcc1Q9CWU6 295 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Notch4P31695 1964 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm20219A0A1B0GRQ3 87 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 4930444P10RikD3YUR1 185 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr739E9Q1P0 309 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Il11P47873 199 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 CortP56469 109 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Htr2bQ02152 479 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Thbs3Q05895 956 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1295Q8VF48 312 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1239Q8VGM8 305 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr206Q8VGP9 306 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Rfpl4aQ8VH31 287 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm3550W4VSN7 160 aa11.5□□□□□ -0.57
Nup88-201ENSMUST00000035283 MiipA2A7Y5 387 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Siglec15A7E1W8 342 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm4787B2RUD9 748 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Amy2a1E9PV85 245 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm6460F6YJZ8 199 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Epha8O09127 1004 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Hist1h2bfP10853 126 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Nkpd1Q0VF94 599 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm20816Q5FWD4 227 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Hist1h2bbQ64475 126 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Foxb1Q64732 325 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Slc25a29Q8BL03 306 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Hist1h2bkQ8CGP1 126 aaKnown RBP11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Hist1h2bpQ8CGP2 126 aaKnown RBP11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Tmprss11dQ8VHK8 417 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Rwdd3Q8VIL2 267 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Osr2Q91ZD1 312 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Abhd12Q99LR1 398 aaKnown RBP11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Fam241aQ9CZL2 131 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr878Q9EQA9 314 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Supt4h1bQ9Z199 117 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm884A2A9H6 3643 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Iglv1A0A075B663 117 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Trav6d-5A0A075B6B9 112 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Rhox7aA2A4F1 281 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Kcnk15B2RVL1 343 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 2010315B03RikJ3QK55 433 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Fpr2O88536 351 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Rac1P63001 192 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm6760Q0ZNK3 87 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Apobec4Q497M3 374 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Klk1b21Q61759 261 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 NppcQ61839 126 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1396Q7TQS8 315 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1294Q8VGE5 312 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Htra3Q9D236 459 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Tmem54Q9D7S1 219 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Jmjd1cQ69ZK6 2350 aa11.49□□□□□ -0.57
Nup88-201ENSMUST00000035283 Ighv1-76A0A0G2JFE9 117 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr250E9PV37 331 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Gm21863J3KMP8 111 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Adh1P00329 375 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 H2-LP01897 362 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Hist1h1aP43275 213 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Rpl29P47915 160 aaKnown RBP11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Fbxo7Q3U7U3 523 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Coq2Q66JT7 374 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Lhfpl1Q80SV1 220 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Rnf170Q8CBG9 286 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Tmem56Q8CGF5 276 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Tlcd2Q8VC26 310 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Olfr1259Q8VEZ1 309 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Rnaseh2cQ9CQ18 166 aa11.48□□□□□ -0.57
Nup88-201ENSMUST00000035283 Phf19Q9CXG9 578 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 107.5 ms