Protein–RNA interactions for Protein: B2RUD9

Gm4787, MCG140564, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4787B2RUD9 Gm25239-201ENSMUST00000174915 86 ntBASIC36.11■■■■□ 3.37
Gm4787B2RUD9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Gm4787B2RUD9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Gm4787B2RUD9 Gm24109-201ENSMUST00000175489 103 ntBASIC31.38■■■□□ 2.61
Gm4787B2RUD9 Gm15042-201ENSMUST00000120212 883 ntBASIC31.35■■■□□ 2.61
Gm4787B2RUD9 Gm15045-201ENSMUST00000117359 883 ntBASIC30.58■■■□□ 2.49
Gm4787B2RUD9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Gm4787B2RUD9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Gm4787B2RUD9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Gm4787B2RUD9 Gm23366-201ENSMUST00000175022 89 ntBASIC30.15■■■□□ 2.42
Gm4787B2RUD9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Gm4787B2RUD9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Gm4787B2RUD9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.35■■■□□ 2.29
Gm4787B2RUD9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Gm4787B2RUD9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Gm4787B2RUD9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.09■■■□□ 2.25
Gm4787B2RUD9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.09■■■□□ 2.25
Gm4787B2RUD9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29■■■□□ 2.23
Gm4787B2RUD9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Gm4787B2RUD9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Gm4787B2RUD9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
Gm4787B2RUD9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Gm4787B2RUD9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Gm4787B2RUD9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.63■■■□□ 2.17
Gm4787B2RUD9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Gm4787B2RUD9 Gm25238-201ENSMUST00000174914 89 ntBASIC28.55■■■□□ 2.16
Gm4787B2RUD9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.43■■■□□ 2.14
Gm4787B2RUD9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Gm4787B2RUD9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Gm4787B2RUD9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Gm4787B2RUD9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Gm4787B2RUD9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Gm4787B2RUD9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
Gm4787B2RUD9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.91■■■□□ 2.06
Gm4787B2RUD9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Gm4787B2RUD9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Gm4787B2RUD9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.74■■■□□ 2.03
Gm4787B2RUD9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
Gm4787B2RUD9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.67■■■□□ 2.02
Gm4787B2RUD9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Gm4787B2RUD9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Gm4787B2RUD9 Gm25262-201ENSMUST00000174934 133 ntBASIC27.51■■□□□ 1.99
Gm4787B2RUD9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Gm4787B2RUD9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.45■■□□□ 1.98
Gm4787B2RUD9 Gm27325-201ENSMUST00000175467 74 ntBASIC27.42■■□□□ 1.98
Gm4787B2RUD9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.31■■□□□ 1.96
Gm4787B2RUD9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Gm4787B2RUD9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Gm4787B2RUD9 Psd-208ENSMUST00000224556 2034 ntBASIC27.11■■□□□ 1.93
Gm4787B2RUD9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.1■■□□□ 1.93
Gm4787B2RUD9 Rab21-202ENSMUST00000218831 843 ntBASIC27.09■■□□□ 1.93
Gm4787B2RUD9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.04■■□□□ 1.92
Gm4787B2RUD9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.03■■□□□ 1.92
Gm4787B2RUD9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Gm4787B2RUD9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Gm4787B2RUD9 Gm26115-201ENSMUST00000175605 87 ntBASIC26.92■■□□□ 1.9
Gm4787B2RUD9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Gm4787B2RUD9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Gm4787B2RUD9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.88■■□□□ 1.89
Gm4787B2RUD9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.81■■□□□ 1.88
Gm4787B2RUD9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Gm4787B2RUD9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.75■■□□□ 1.87
Gm4787B2RUD9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Gm4787B2RUD9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Gm4787B2RUD9 Gm8109-201ENSMUST00000194076 746 ntBASIC26.71■■□□□ 1.87
Gm4787B2RUD9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Gm4787B2RUD9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.66■■□□□ 1.86
Gm4787B2RUD9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Gm4787B2RUD9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Gm4787B2RUD9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.6■■□□□ 1.85
Gm4787B2RUD9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Gm4787B2RUD9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Gm4787B2RUD9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.53■■□□□ 1.84
Gm4787B2RUD9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Gm4787B2RUD9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.49■■□□□ 1.83
Gm4787B2RUD9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Gm4787B2RUD9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Gm4787B2RUD9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.44■■□□□ 1.82
Gm4787B2RUD9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Gm4787B2RUD9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Gm4787B2RUD9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Gm4787B2RUD9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Gm4787B2RUD9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Gm4787B2RUD9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Gm4787B2RUD9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Gm4787B2RUD9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Gm4787B2RUD9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.17■■□□□ 1.78
Gm4787B2RUD9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Gm4787B2RUD9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.14■■□□□ 1.78
Gm4787B2RUD9 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.14■■□□□ 1.78
Gm4787B2RUD9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Gm4787B2RUD9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Gm4787B2RUD9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.04■■□□□ 1.76
Gm4787B2RUD9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Gm4787B2RUD9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Gm4787B2RUD9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Gm4787B2RUD9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.98■■□□□ 1.75
Gm4787B2RUD9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Gm4787B2RUD9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
Gm4787B2RUD9 Gm27322-201ENSMUST00000184007 104 ntBASIC25.93■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms