RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 ZNF550Q7Z398 422 aa3.09□□□□□ -1.91
LINC00458-206ENST00000607494 LRRC34Q8IZ02 419 aa3.09□□□□□ -1.91
LINC00458-206ENST00000607494 RNF182Q8N6D2 247 aa3.09□□□□□ -1.91
LINC00458-206ENST00000607494 CD200R1Q8TD46 325 aa3.09□□□□□ -1.91
LINC00458-206ENST00000607494 MS4A6EQ96DS6 147 aa3.09□□□□□ -1.91
LINC00458-206ENST00000607494 PRAP1Q96NZ9 151 aa3.09□□□□□ -1.91
LINC00458-206ENST00000607494 ZNF2Q9BSG1 426 aaPredicted RBP3.09□□□□□ -1.91
LINC00458-206ENST00000607494 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.09□□□□□ -1.91
LINC00458-206ENST00000607494 ALPK3Q96L96 1907 aa3.09□□□□□ -1.92
LINC00458-206ENST00000607494 SPEF2Q9C093 1822 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 M0R381 172 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 MT-CO2P00403 227 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 INAFM2P0DMQ5 153 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 ALOX5APP20292 161 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 MARCKSL1P49006 195 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 AKR1C2P52895 323 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 TMEM33P57088 247 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 ZNF660Q6AZW8 331 aaPredicted RBP3.08□□□□□ -1.92
LINC00458-206ENST00000607494 ZFAND2AQ8N6M9 145 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 ZNF680Q8NEM1 530 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 DEDD2Q8WXF8 326 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 DIRAS2Q96HU8 199 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 TBX5Q99593 518 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 RSPO3Q9BXY4 272 aaPredicted RBP3.08□□□□□ -1.92
LINC00458-206ENST00000607494 FKBP14Q9NWM8 211 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 VPS29Q9UBQ0 182 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 SZT2Q5T011 3432 aa3.08□□□□□ -1.92
LINC00458-206ENST00000607494 ECM29Q5VYK3 1845 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 KMT2EQ8IZD2 1858 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 CLDN24A6NM45 220 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 DISC1C4P0D8 188 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 GSTZ1O43708 216 aaPredicted RBP3.07□□□□□ -1.92
LINC00458-206ENST00000607494 SLC25A20O43772 301 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 CD7P09564 240 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 HSD11B1P28845 292 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 SPCS3P61009 180 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 PRDX4Q13162 271 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 C1orf194Q5T5A4 169 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 HIST2H3PS2Q5TEC6 136 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 SBSNQ6UWP8 590 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 HIST2H3AQ71DI3 136 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 CLDN22Q8N7P3 220 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 OR5P3Q8WZ94 311 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 PECRQ9BY49 303 aa3.07□□□□□ -1.92
LINC00458-206ENST00000607494 ZNF443Q9Y2A4 671 aaPredicted RBP3.07□□□□□ -1.92
LINC00458-206ENST00000607494 CARHSP1Q9Y2V2 147 aaKnown RBP3.07□□□□□ -1.92
LINC00458-206ENST00000607494 IGKV1D-37A0A075B6S9 117 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 TMED7-TICAM2A0A0A6YYA0 188 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 COL1A1P02452 1464 aaPredicted RBP3.06□□□□□ -1.92
LINC00458-206ENST00000607494 OR5G3P0C626 314 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 CRABP1P29762 137 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 MAP2K4P45985 399 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 FOXA1P55317 472 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 DHRS2Q13268 280 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 LY6EQ16553 131 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 LGALSLQ3ZCW2 172 aaPredicted RBP3.06□□□□□ -1.92
LINC00458-206ENST00000607494 PYCR3Q53H96 274 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 SPIN3Q5JUX0 258 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 THADAQ6YHU6 1953 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 BAP18Q8IXM2 172 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 C1orf174Q8IYL3 243 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 C1orf158Q8N1D5 194 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 TMEM86BQ8N661 226 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 OR51D1Q8NGF3 324 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 OR5B17Q8NGF7 314 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 SLC35B4Q969S0 331 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 CPNE2Q96FN4 548 aaPredicted RBP3.06□□□□□ -1.92
LINC00458-206ENST00000607494 C1QTNF6Q9BXI9 259 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 TAS2R1Q9NYW7 299 aa3.06□□□□□ -1.92
LINC00458-206ENST00000607494 MARCOQ9UEW3 520 aaPredicted RBP3.06□□□□□ -1.92
LINC00458-206ENST00000607494 RANBP2P49792 3224 aaKnown RBP3.05□□□□□ -1.92
LINC00458-206ENST00000607494 COL6A3P12111 3177 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 A0A0C4DFX4 3053 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 MED23Q9ULK4 1368 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 C15orf65H3BRN8 121 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 IGHMP01871 453 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 ATP6V0CP27449 155 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 CDK9P50750 372 aaKnown RBP3.05□□□□□ -1.92
LINC00458-206ENST00000607494 OR4D2P58180 307 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 RPS11P62280 158 aaKnown RBP eCLIP3.05□□□□□ -1.92
LINC00458-206ENST00000607494 BTN3A2P78410 334 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 IFITM2Q01629 132 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 PLPPR5Q32ZL2 321 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 KRTAP13-2Q52LG2 175 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 LRRC25Q8N386 305 aaPredicted RBP3.05□□□□□ -1.92
LINC00458-206ENST00000607494 DEFB125Q8N687 156 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 DEFB123Q8N688 67 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 LY6G5BQ8NDX9 201 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 NUP205Q92621 2012 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 MGAMO43451 1857 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 A0A1B0GUL6 1792 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 ARAP2Q8WZ64 1704 aa3.05□□□□□ -1.92
LINC00458-206ENST00000607494 CENPFP49454 3210 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 MYH3P11055 1940 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 CHP2O43745 196 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 FADS1O60427 444 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 APOMO95445 188 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 HLA-DQB2P05538 268 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 IGHV3-30-3P0DP02 117 aa3.04□□□□□ -1.92
LINC00458-206ENST00000607494 CCL5P13501 91 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms