RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 PITX3O75364 302 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 RBMXL2O75526 392 aaKnown RBP13.49□□□□□ -0.25
CADM1-220ENST00000546000 HLA-GP17693 338 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 RPL8P62917 257 aaKnown RBP13.49□□□□□ -0.25
CADM1-220ENST00000546000 BLCAPP62952 87 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 CD300CQ08708 224 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 SCGB2A2Q13296 93 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 C9orf152Q5JTZ5 239 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 OR8H1Q8NGG4 311 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 VSTM2AQ8TAG5 236 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 ZNF418Q8TF45 676 aaPredicted RBP13.49□□□□□ -0.25
CADM1-220ENST00000546000 RASL11BQ9BPW5 248 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 FAM103A1Q9BTL3 118 aaKnown RBP13.49□□□□□ -0.25
CADM1-220ENST00000546000 MAGT1Q9H0U3 335 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 C1RLQ9NZP8 487 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 FOXA2Q9Y261 457 aaPredicted RBP13.49□□□□□ -0.25
CADM1-220ENST00000546000 FBXO7Q9Y3I1 522 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 OR51B2Q9Y5P1 312 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 POMT1Q9Y6A1 747 aa13.49□□□□□ -0.25
CADM1-220ENST00000546000 PLXNB1O43157 2135 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 IGHV7-81A0A0B4J1V7 117 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 A0A1B0GU03 582 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 LINC01548A6NM66 108 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 SMLR1H3BR10 107 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 SNAPC5O75971 98 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 APELAP0DMC3 54 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 HILS1P60008 231 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 TMEM95Q3KNT9 176 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 FOXRED2Q8IWF2 684 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 TMEM86BQ8N661 226 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 OR4A5Q8NH83 315 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 GRPEL2Q8TAA5 225 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 C2orf50Q96LR7 162 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 SPIN2AQ99865 258 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 SPIN2BQ9BPZ2 258 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 AIFM2Q9BRQ8 373 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 HINT2Q9BX68 163 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 ZNF436Q9C0F3 470 aaPredicted RBP13.48□□□□□ -0.25
CADM1-220ENST00000546000 TMEM14BQ9NUH8 114 aa13.48□□□□□ -0.25
CADM1-220ENST00000546000 TNCP24821 2201 aa13.47□□□□□ -0.25
CADM1-220ENST00000546000 FGF16O43320 207 aa13.47□□□□□ -0.25
CADM1-220ENST00000546000 HLA-DRB1P01911 266 aa13.47□□□□□ -0.25
CADM1-220ENST00000546000 UBA52P62987 128 aaKnown RBP13.47□□□□□ -0.25
CADM1-220ENST00000546000 CX3CL1P78423 397 aa13.47□□□□□ -0.25
CADM1-220ENST00000546000 LRRC37A5PQ49AS3 106 aa13.47□□□□□ -0.25
CADM1-220ENST00000546000 C19orf35Q6ZS72 473 aa13.47□□□□□ -0.25
CADM1-220ENST00000546000 MMD2Q8IY49 270 aa13.47□□□□□ -0.25
CADM1-220ENST00000546000 RANGRFQ9HD47 186 aaPredicted RBP13.47□□□□□ -0.25
CADM1-220ENST00000546000 PRNDQ9UKY0 176 aa13.47□□□□□ -0.25
CADM1-220ENST00000546000 TEX50A0A1B0GTY4 177 aa13.46□□□□□ -0.25
CADM1-220ENST00000546000 MBPP02686 304 aaPredicted RBP13.46□□□□□ -0.25
CADM1-220ENST00000546000 SLC25A6P12236 298 aa13.46□□□□□ -0.25
CADM1-220ENST00000546000 RPL27AP46776 148 aaKnown RBP13.46□□□□□ -0.25
CADM1-220ENST00000546000 COMPP49747 757 aaPredicted RBP13.46□□□□□ -0.25
CADM1-220ENST00000546000 S100A10P60903 97 aa13.46□□□□□ -0.25
CADM1-220ENST00000546000 POLR2GP62487 172 aaKnown RBP eCLIP13.46□□□□□ -0.25
CADM1-220ENST00000546000 IL15RAQ13261 267 aa13.46□□□□□ -0.25
CADM1-220ENST00000546000 Q5BKY6 102 aa13.46□□□□□ -0.25
CADM1-220ENST00000546000 C16orf82Q7Z2V1 217 aa13.46□□□□□ -0.25
CADM1-220ENST00000546000 ABHD5Q8WTS1 349 aa13.46□□□□□ -0.25
CADM1-220ENST00000546000 FYTTD1Q96QD9 318 aaKnown RBP13.46□□□□□ -0.25
CADM1-220ENST00000546000 RBKSQ9H477 322 aa13.46□□□□□ -0.25
CADM1-220ENST00000546000 PARP11Q9NR21 331 aa13.46□□□□□ -0.25
CADM1-220ENST00000546000 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.46□□□□□ -0.25
CADM1-220ENST00000546000 LSM5Q9Y4Y9 91 aaKnown RBP13.46□□□□□ -0.25
CADM1-220ENST00000546000 FAM181BA6NEQ2 426 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 TEX22C9J3V5 150 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 ATP6V0E1O15342 81 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 IFNA17P01571 189 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 IAPPP10997 89 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 TNFRSF9Q07011 255 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 RAB32Q13637 225 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 FXYD3Q14802 87 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 AARDQ4LEZ3 155 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 OR10W1Q8NGF6 305 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 SRSF12Q8WXF0 261 aaKnown RBP13.45□□□□□ -0.26
CADM1-220ENST00000546000 ARPC1AQ92747 370 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 ST6GAL2Q96JF0 529 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 ZNF702PQ9H963 129 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 COA4Q9NYJ1 87 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 LINC00527Q9UJ94 153 aa13.45□□□□□ -0.26
CADM1-220ENST00000546000 RCL1Q9Y2P8 373 aaKnown RBP13.45□□□□□ -0.26
CADM1-220ENST00000546000 TRAV14DV4A0A0A6YYC5 116 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 PIGBOS1A0A0B4J2F0 54 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 G3V3Q6 166 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 K7EPK0 472 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 SSSCA1O60232 199 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 CNIH1O95406 144 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 REG1AP05451 166 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 RNASE1P07998 156 aaKnown RBP13.44□□□□□ -0.26
CADM1-220ENST00000546000 GIPP09681 153 aaPredicted RBP13.44□□□□□ -0.26
CADM1-220ENST00000546000 TRAPPC2P0DI81 140 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 TRAPPC2BP0DI82 140 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 EGR2P11161 476 aaPredicted RBP13.44□□□□□ -0.26
CADM1-220ENST00000546000 NKX2-1P43699 371 aaPredicted RBP13.44□□□□□ -0.26
CADM1-220ENST00000546000 SRSF4Q08170 494 aaKnown RBP13.44□□□□□ -0.26
CADM1-220ENST00000546000 ZNF429Q86V71 674 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 COMMD5Q9GZQ3 224 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 HSPB7Q9UBY9 170 aa13.44□□□□□ -0.26
CADM1-220ENST00000546000 JMJD1CQ15652 2540 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms