RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 OR5B3Q8NH48 314 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 OR4F4Q96R69 305 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 CITED2Q99967 270 aaPredicted RBP14.72□□□□□ -0.05
VPS33A-205ENST00000541169 VSIG4Q9Y279 399 aa14.72□□□□□ -0.05
VPS33A-205ENST00000541169 G3V318 75 aa14.71□□□□□ -0.05
VPS33A-205ENST00000541169 DHFRP00374 187 aa14.71□□□□□ -0.05
VPS33A-205ENST00000541169 OR5AC1P0C628 307 aa14.71□□□□□ -0.05
VPS33A-205ENST00000541169 AKR1C4P17516 323 aa14.71□□□□□ -0.05
VPS33A-205ENST00000541169 CDX1P47902 265 aaPredicted RBP14.71□□□□□ -0.05
VPS33A-205ENST00000541169 SSBP2P81877 361 aaPredicted RBP14.71□□□□□ -0.05
VPS33A-205ENST00000541169 SRSF4Q08170 494 aaKnown RBP14.71□□□□□ -0.05
VPS33A-205ENST00000541169 GLYATL2Q8WU03 294 aa14.71□□□□□ -0.05
VPS33A-205ENST00000541169 RBPMSQ93062 196 aaKnown RBP14.71□□□□□ -0.05
VPS33A-205ENST00000541169 RRNAD1Q96FB5 475 aaKnown RBP14.71□□□□□ -0.05
VPS33A-205ENST00000541169 TMEM56Q96MV1 263 aa14.71□□□□□ -0.05
VPS33A-205ENST00000541169 ZNF257Q9Y2Q1 563 aa14.71□□□□□ -0.05
VPS33A-205ENST00000541169 FBXO7Q9Y3I1 522 aa14.71□□□□□ -0.05
VPS33A-205ENST00000541169 TMEM56-RWDD3S4R434 201 aa14.71□□□□□ -0.05
VPS33A-205ENST00000541169 A0A1W2PN81 502 aa14.7□□□□□ -0.06
VPS33A-205ENST00000541169 UPK1BO75841 260 aa14.7□□□□□ -0.06
VPS33A-205ENST00000541169 CHRNA7P36544 502 aa14.7□□□□□ -0.06
VPS33A-205ENST00000541169 AKR1C2P52895 323 aa14.7□□□□□ -0.06
VPS33A-205ENST00000541169 TCTEX1D4Q5JR98 221 aa14.7□□□□□ -0.06
VPS33A-205ENST00000541169 PRR31Q5SQ13 230 aa14.7□□□□□ -0.06
VPS33A-205ENST00000541169 TMED4Q7Z7H5 227 aa14.7□□□□□ -0.06
VPS33A-205ENST00000541169 ZNF695Q8IW36 515 aa14.7□□□□□ -0.06
VPS33A-205ENST00000541169 OR4A16Q8NH70 328 aa14.7□□□□□ -0.06
VPS33A-205ENST00000541169 UBE2E2Q96LR5 201 aa14.7□□□□□ -0.06
VPS33A-205ENST00000541169 FAM103A1Q9BTL3 118 aaKnown RBP14.7□□□□□ -0.06
VPS33A-205ENST00000541169 PLA2G10O15496 165 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 CYB5BO43169 146 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 OR9G9P0C7N8 305 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 PF4V1P10720 104 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 RAB9AP51151 201 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 RPL23AP62750 156 aaKnown RBP14.69□□□□□ -0.06
VPS33A-205ENST00000541169 ASAH1Q13510 395 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 ZNF429Q86V71 674 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 TTC9CQ8N5M4 171 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 C11orf44Q8N8P7 122 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 OR1L8Q8NGR8 309 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 MYOZ3Q8TDC0 251 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 TMEM230Q96A57 120 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 QTRT1Q9BXR0 403 aaKnown RBP14.69□□□□□ -0.06
VPS33A-205ENST00000541169 TMEM14BQ9NUH8 114 aa14.69□□□□□ -0.06
VPS33A-205ENST00000541169 PLXNB1O43157 2135 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 TNCP24821 2201 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 A0A0G2JLM5 398 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 LINC00854A0A1B0GVQ3 168 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 DUXBA0A1W2PPF3 345 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 NPIPB5A8MRT5 1133 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 IGKV1-39P01597 117 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 IGKV1D-39P04432 117 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 CCR6P51684 374 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 RAB25P57735 213 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 DEFA1P59665 94 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 DEFA3P59666 94 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 OR2B8PP59922 312 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 SP6Q3SY56 376 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 KHDC1LQ5JSQ8 128 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 LGI3Q8N145 548 aa14.68□□□□□ -0.06
VPS33A-205ENST00000541169 ADAD2Q8NCV1 583 aaKnown RBP14.68□□□□□ -0.06
VPS33A-205ENST00000541169 RNASE11Q8TAA1 199 aaKnown RBP14.68□□□□□ -0.06
VPS33A-205ENST00000541169 FAM110DQ8TAY7 271 aaPredicted RBP14.68□□□□□ -0.06
VPS33A-205ENST00000541169 LSM10Q969L4 123 aaKnown RBP14.68□□□□□ -0.06
VPS33A-205ENST00000541169 C15orf61A6NNL5 157 aa14.67□□□□□ -0.06
VPS33A-205ENST00000541169 TRAPPC2P0DI81 140 aa14.67□□□□□ -0.06
VPS33A-205ENST00000541169 TRAPPC2BP0DI82 140 aa14.67□□□□□ -0.06
VPS33A-205ENST00000541169 FAM209BQ5JX69 171 aa14.67□□□□□ -0.06
VPS33A-205ENST00000541169 C10orf99Q6UWK7 81 aa14.67□□□□□ -0.06
VPS33A-205ENST00000541169 ALX4Q9H161 411 aaPredicted RBP14.67□□□□□ -0.06
VPS33A-205ENST00000541169 A0A0B4J2A0 478 aa14.66□□□□□ -0.06
VPS33A-205ENST00000541169 RBMXL2O75526 392 aaKnown RBP14.66□□□□□ -0.06
VPS33A-205ENST00000541169 RPLP1P05386 114 aaKnown RBP14.66□□□□□ -0.06
VPS33A-205ENST00000541169 HIST1H1BP16401 226 aaKnown RBP14.66□□□□□ -0.06
VPS33A-205ENST00000541169 VAMP1P23763 118 aa14.66□□□□□ -0.06
VPS33A-205ENST00000541169 BTCP35070 178 aa14.66□□□□□ -0.06
VPS33A-205ENST00000541169 SUPT4H1P63272 117 aaKnown RBP14.66□□□□□ -0.06
VPS33A-205ENST00000541169 TMEM187Q14656 261 aa14.66□□□□□ -0.06
VPS33A-205ENST00000541169 TMEM268Q5VZI3 342 aa14.66□□□□□ -0.06
VPS33A-205ENST00000541169 C4orf3Q8WVX3 66 aa14.66□□□□□ -0.06
VPS33A-205ENST00000541169 USMG5Q96IX5 58 aa14.66□□□□□ -0.06
VPS33A-205ENST00000541169 FYTTD1Q96QD9 318 aaKnown RBP14.66□□□□□ -0.06
VPS33A-205ENST00000541169 PDCD10Q9BUL8 212 aa14.66□□□□□ -0.06
VPS33A-205ENST00000541169 ZNF355PQ9NSJ1 428 aa14.66□□□□□ -0.06
VPS33A-205ENST00000541169 SHPKQ9UHJ6 478 aa14.66□□□□□ -0.06
VPS33A-205ENST00000541169 OR51B2Q9Y5P1 312 aa14.66□□□□□ -0.06
VPS33A-205ENST00000541169 FAM240BA0A1B0GVZ2 78 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 NUDT19A8MXV4 375 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 TEX22C9J3V5 150 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 SFT2D2O95562 160 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 CRYGCP07315 174 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 P0C879 139 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 RUNX1Q01196 453 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 NSUN5P1Q3KNT7 163 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 SELENOHQ8IZQ5 122 aaKnown RBP14.65□□□□□ -0.06
VPS33A-205ENST00000541169 ZNF491Q8N8L2 437 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 LRTM2Q8N967 370 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 OR5T1Q8NG75 326 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 OR1L6Q8NGR2 347 aa14.65□□□□□ -0.06
VPS33A-205ENST00000541169 NDUFA4L2Q9NRX3 87 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms