RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 TMEM68Q96MH6 324 aa12.44□□□□□ -0.42
SH3TC1-223ENST00000513495 ZNF580Q9UK33 172 aa12.44□□□□□ -0.42
SH3TC1-223ENST00000513495 OR51B2Q9Y5P1 312 aa12.44□□□□□ -0.42
SH3TC1-223ENST00000513495 TRAV41A0A0B4J266 112 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 C15orf61A6NNL5 157 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 IGF1P05019 195 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 IL6RP08887 468 aaPredicted RBP12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 SULT1A3P0DMM9 295 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 SULT1A4P0DMN0 295 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 MDKP21741 143 aaPredicted RBP12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 Q6ZS46 218 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 LYZL2Q7Z4W2 148 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 STPG2Q8N412 459 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 C12orf45Q8N5I9 185 aaPredicted RBP12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 UXS1Q8NBZ7 420 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 OR52B4Q8NGK2 314 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 OR1L8Q8NGR8 309 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 OR5B3Q8NH48 314 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 SGMS2Q8NHU3 365 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 FYTTD1Q96QD9 318 aaKnown RBP12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 SEC22CQ9BRL7 303 aa12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.43□□□□□ -0.42
SH3TC1-223ENST00000513495 TRAV3A0A0B4J244 114 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 PSMB11A5LHX3 300 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 SNRPGP15A8MWD9 76 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 HAX1O00165 279 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 HOXB5P09067 269 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 OR9G9P0C7N8 305 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 SPNP16150 400 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 OR2B8PP59922 312 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 ECSCRQ19T08 205 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 TMEM95Q3KNT9 176 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 UNQ5815/PRO19632Q6UWF5 114 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 HSD17B13Q7Z5P4 300 aaPredicted RBP12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 TAF15Q92804 592 aaKnown RBP eCLIP12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 HINT2Q9BX68 163 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 SERTAD4Q9NUC0 356 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 CACNG5Q9UF02 275 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 FOXA2Q9Y261 457 aaPredicted RBP12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 ZNF257Q9Y2Q1 563 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 NSG2Q9Y328 171 aa12.42□□□□□ -0.42
SH3TC1-223ENST00000513495 ATRQ13535 2644 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 A0A1B0GU03 582 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 MSGN1A6NI15 193 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 IFNA17P01571 189 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 OPN1MWP04001 364 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 P0C879 139 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 TRAPPC2P0DI81 140 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 TRAPPC2BP0DI82 140 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 OPN1MW2P0DN77 364 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 OPN1MW3P0DN78 364 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 SMCO1Q147U7 214 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 AKIRIN2Q53H80 203 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 ZNF429Q86V71 674 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 KLHDC1Q8N7A1 406 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 OR1S1Q8NH92 325 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 NOL4LQ96MY1 436 aaPredicted RBP12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 SRSF8Q9BRL6 282 aaKnown RBP12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 FAM103A1Q9BTL3 118 aaKnown RBP12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 QTRT1Q9BXR0 403 aaKnown RBP12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 ENY2Q9NPA8 101 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 TMEM14BQ9NUH8 114 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 COA4Q9NYJ1 87 aa12.41□□□□□ -0.42
SH3TC1-223ENST00000513495 TEX50A0A1B0GTY4 177 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 A0A1W2PN81 502 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 LINC01548A6NM66 108 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 SSNA1O43805 119 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 SLC25A6P12236 298 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 CHRNA7P36544 502 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 NDPQ00604 133 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 TATDN3Q17R31 274 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 MRGPRG-AS1Q2M3A8 158 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 KRTAP21-3Q3LHN1 58 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 AWAT1Q58HT5 328 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 NMSQ5H8A3 153 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 GGNBP1Q5YKI7 109 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 C12orf54Q6X4T0 127 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 COMMD1Q8N668 190 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 LFNGQ8NES3 379 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 OR4X2Q8NGF9 303 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 GPR146Q96CH1 333 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 LINC00527Q9UJ94 153 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 WSB1Q9Y6I7 421 aa12.4□□□□□ -0.42
SH3TC1-223ENST00000513495 A0A0B4J293 547 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 A0A0G2JRQ6 117 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 CYB5BO43169 146 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 CRIP2P52943 208 aaPredicted RBP12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 HSPE1P61604 102 aaKnown RBP12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 OXA1LQ15070 435 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 IZUMO4Q1ZYL8 232 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 C10orf55Q5SWW7 151 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 TEX38Q6PEX7 206 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 TMEM65Q6PI78 240 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 OR5M8Q8NGP6 311 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 WNT10AQ9GZT5 417 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 PLEKHA3Q9HB20 300 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 TNCP24821 2201 aa12.39□□□□□ -0.43
SH3TC1-223ENST00000513495 PLXNB1O43157 2135 aa12.38□□□□□ -0.43
SH3TC1-223ENST00000513495 FAM25EA8MYX2 175 aa12.38□□□□□ -0.43
SH3TC1-223ENST00000513495 ST8SIA3O43173 380 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms