RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CALYQ9NYX4 217 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 PAM16Q9Y3D7 125 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 CRYBB3P26998 211 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 OPRK1P41145 380 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 ZNF134P52741 427 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 OR51M1Q9H341 326 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 SEPSECSQ9HD40 501 aaKnown RBP11.18□□□□□ -0.62
GPC1-209ENST00000495100 PIEZO1Q92508 2521 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 FCN1O00602 326 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 NPY1RP25929 384 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 ATOH7Q8N100 152 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 ZNF114Q8NC26 417 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 MDS2Q8NDY4 140 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 MISP3Q96FF7 219 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 C5orf30Q96GV9 206 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 SLC35D1Q9NTN3 355 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 TCF19Q9Y242 345 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 J3QR06 171 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 MMP23AO75900 390 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 IGLV2-14P01704 120 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 SERF2P84101 59 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 ZNF295-AS1Q8N0V1 137 aa11.18□□□□□ -0.62
GPC1-209ENST00000495100 CIB3Q96Q77 187 aaPredicted RBP11.18□□□□□ -0.62
GPC1-209ENST00000495100 IGHV3-35A0A0C4DH35 117 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 COX5BP10606 129 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 GZMHP20718 246 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 HOXA5P20719 270 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 OR10J1P30954 320 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 FOXC1Q12948 553 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 CISD1Q9NZ45 108 aaKnown RBP11.17□□□□□ -0.62
GPC1-209ENST00000495100 OR6C3Q9NZP0 311 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 IGHV3OR16-8A0A075B7F1 116 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 LY6HO94772 140 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 CA2P00918 260 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 LGALS4P56470 323 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 GNB2P62879 340 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 TMEM256Q8N2U0 113 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 RBMXL3Q8N7X1 1067 aaKnown RBP11.17□□□□□ -0.62
GPC1-209ENST00000495100 SCRT1Q9BWW7 348 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 CBLN4Q9NTU7 201 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 USP9XQ93008 2570 aaPredicted RBP11.17□□□□□ -0.62
GPC1-209ENST00000495100 IGKV1-16P04430 117 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 TNFSF4P23510 183 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 RPL31P62899 125 aaKnown RBP11.17□□□□□ -0.62
GPC1-209ENST00000495100 CLCF1Q9UBD9 225 aa11.17□□□□□ -0.62
GPC1-209ENST00000495100 WNK1Q9H4A3 2382 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 SVEP1Q4LDE5 3571 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 IGKV1D-17A0A075B6S4 117 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 TRGV8A0A0C4DH27 118 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 RANP62826 216 aaKnown RBP11.16□□□□□ -0.62
GPC1-209ENST00000495100 MSMPQ1L6U9 139 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 OR8I2Q8N0Y5 310 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 BTF3L4Q96K17 158 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 HARBI1Q96MB7 349 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 CSMD1Q96PZ7 3565 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A27PA6NNH2 459 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 LEMD1Q68G75 181 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 MIR17HGQ75NE6 70 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 GCSAMQ8N6F7 178 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 LSM10Q969L4 123 aaKnown RBP11.16□□□□□ -0.62
GPC1-209ENST00000495100 LINC00479Q96M42 142 aa11.16□□□□□ -0.62
GPC1-209ENST00000495100 TRAV5A0A0B4J249 113 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 KBTBD11O94819 623 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 PQLC2Q6ZP29 291 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 MS4A10Q96PG2 267 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 MRPL37Q9BZE1 423 aaKnown RBP11.15□□□□□ -0.62
GPC1-209ENST00000495100 RNASE7Q9H1E1 156 aaKnown RBP11.15□□□□□ -0.62
GPC1-209ENST00000495100 SAA2-SAA4A0A096LPE2 208 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 CYC1P08574 325 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 SAA2P0DJI9 122 aaPredicted RBP11.15□□□□□ -0.62
GPC1-209ENST00000495100 CD82P27701 267 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 HES1Q14469 280 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 DPPA3Q6W0C5 159 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 SLC24A4Q8NFF2 622 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 OR9G1Q8NH87 305 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 OR2T6Q8NHC8 308 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 VN1R17PQ8TDU5 208 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 HIST1H2BLQ99880 126 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 MOSP00540 346 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 FRMD6-AS1P0C7T7 363 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 RPP30P78346 268 aaKnown RBP11.15□□□□□ -0.62
GPC1-209ENST00000495100 TRAT1Q6PIZ9 186 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 STPG3Q8N7X2 389 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 WDR31Q8NA23 367 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 OR51B2Q9Y5P1 312 aa11.15□□□□□ -0.62
GPC1-209ENST00000495100 DUXBA0A1W2PPF3 345 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 SNURFLB1AK76 121 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 C22orf34Q6ZV56 151 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 IFITM10A6NMD0 228 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 IQCF6A8MYZ5 107 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 PRR33A8MZF0 331 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 MBP02144 154 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 DUTP33316 252 aaKnown RBP11.14□□□□□ -0.63
GPC1-209ENST00000495100 ZNF146Q15072 292 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 MORN2Q502X0 79 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 OR4A47Q6IF82 309 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 GSX1Q9H4S2 264 aaPredicted RBP11.14□□□□□ -0.63
GPC1-209ENST00000495100 A8MXE2 369 aa11.14□□□□□ -0.63
GPC1-209ENST00000495100 SLC25A17O43808 307 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms