RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 SELENOWP63302 87 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 CCL7P80098 99 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 FAM3AP98173 230 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 MLLT11Q13015 90 aaPredicted RBP4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 COX19Q49B96 90 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 YIF1BQ5BJH7 314 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 DNM1P34Q6PK57 102 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 MSRB3Q8IXL7 192 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 ZNF786Q8N393 782 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 RNF175Q8N4F7 328 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 LINC00471Q8N535 108 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 CYB561D1Q8N8Q1 229 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 C17orf50Q8WW18 174 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 TMBIM1Q969X1 311 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 SMIM19Q96E16 107 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 OR2A7Q96R45 310 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 MS4A8Q9BY19 250 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 TBL1XR1Q9BZK7 514 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 SCN3BQ9NY72 215 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 TP53TG3Q9ULZ0 132 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 CSMD1Q96PZ7 3565 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 SPENQ96T58 3664 aaKnown RBP4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 ADGRG4Q8IZF6 3080 aa4.74□□□□□ -1.65
GAPVD1-217ENST00000479511 CENPEQ02224 2701 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 TRAV8-2A0A0B4J237 113 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 CCDC160A6NGH7 325 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 H0Y980 276 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 CCRL2O00421 344 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 PHYHO14832 338 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 ACOX3O15254 700 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 MRPS14O60783 128 aaKnown RBP4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 CECR9P0C854 216 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 HIST1H1TP22492 207 aaPredicted RBP4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 CDKN2CP42773 168 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 HBA1P69905 142 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 CDK6Q00534 326 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 SSX1Q16384 188 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 HLA-DRB5Q30154 266 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 AP1ARQ63HQ0 302 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 CLECL1Q8IZS7 167 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 OR4E2Q8NGC2 313 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 OR6K3Q8NGY3 331 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 FAM57AQ8TBR7 257 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 RNF133Q8WVZ7 376 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 ZNF436Q9C0F3 470 aaPredicted RBP4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 GABARAPL1Q9H0R8 117 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 TAS2R5Q9NYW4 299 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 TP53TG1Q9Y2A0 90 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 TPRKBQ9Y3C4 175 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 SAMHD1Q9Y3Z3 626 aaKnown RBP4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 ZNF706Q9Y5V0 76 aaPredicted RBP4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 V9GYQ6 96 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 RP1L1Q8IWN7 2480 aaPredicted RBP4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 HIVEP1P15822 2718 aa4.73□□□□□ -1.65
GAPVD1-217ENST00000479511 ANKHD1Q8IWZ3 2542 aaKnown RBP4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 TRAV8-3A0A0A6YYJ7 113 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 LOC100130705A0A1B0GUX0 176 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 A0A1W2PNU3 283 aaPredicted RBP4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 KRTAP1-4P0C5Y4 121 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 IFNGR2P38484 337 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 GABARAPL2P60520 117 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 CXCR4P61073 352 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 HPCAP84074 193 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 BIKQ13323 160 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 RGS21Q2M5E4 152 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 ZNF684Q5T5D7 378 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 FAM162BQ5T6X4 162 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 LINC00596Q86U02 117 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 PDPNQ86YL7 162 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 OR5M1Q8NGP8 315 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 STOML3Q8TAV4 291 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 MS4A6EQ96DS6 147 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 KCTD7Q96MP8 289 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 ZNF223Q9UK11 482 aaPredicted RBP4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 TMEM14AQ9Y6G1 99 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 COL27A1Q8IZC6 1860 aaPredicted RBP4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 PDZD2O15018 2839 aa4.72□□□□□ -1.65
GAPVD1-217ENST00000479511 NBASA2RRP1 2371 aa4.71□□□□□ -1.65
GAPVD1-217ENST00000479511 ZFC3H1O60293 1989 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 SCN8AQ9UQD0 1980 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 HIVEP3Q5T1R4 2406 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 AKAP9Q99996 3911 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 IGHV3-49A0A0A0MS15 119 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 WI2-2373I1.2A0A1W2PRP0 233 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 ARRDC5A6NEK1 342 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 HLA-DQB1P01920 261 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 IFI6P09912 130 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 COX6B1P14854 86 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 ATF1P18846 271 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 BTN3A2P78410 334 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 PDZD11Q5EBL8 140 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 CRYBG3Q68DQ2 2970 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 ZNF773Q6PK81 442 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 MUC15Q8N387 334 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 OR10G2Q8NGC3 310 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 CCL4L1Q8NHW4 92 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 SLC35G5Q96KT7 338 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 NDFIP1Q9BT67 221 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 DDA1Q9BW61 102 aa4.71□□□□□ -1.66
GAPVD1-217ENST00000479511 YIPF3Q9GZM5 350 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms