RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 GTF3C1Q12789 2109 aa11.38□□□□□ -0.59
PTPRE-204ENST00000455661 PRSS46E5RG02 174 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 FOXH1O75593 365 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 TSPOP30536 169 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 HINT1P49773 126 aaPredicted RBP11.37□□□□□ -0.59
PTPRE-204ENST00000455661 RBX1P62877 108 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 MRPL49Q13405 166 aaKnown RBP11.37□□□□□ -0.59
PTPRE-204ENST00000455661 SPATA31B1PQ5VZV4 182 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 PQLC2Q6ZP29 291 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 MDP1Q86V88 176 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 ABHD12Q8N2K0 398 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 STPG3Q8N7X2 389 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 OR2D3Q8NGH3 330 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 OR5B3Q8NH48 314 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 LSM4Q9Y4Z0 139 aaKnown RBP11.37□□□□□ -0.59
PTPRE-204ENST00000455661 COX11Q9Y6N1 276 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 ARL2-SNX15V9GYD0 113 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 DEFB108AA8MXU0 73 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 J3QW42 95 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 ITGB1BP1O14713 200 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 GFRA3O60609 400 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 CGAP01215 116 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 NTF3P20783 257 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 GPR12P47775 334 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 GABRA6Q16445 453 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 PPP1R32Q7Z5V6 425 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 NIT1Q86X76 327 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 MED12LQ86YW9 2145 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 ZNF439Q8NDP4 499 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 TSKUQ8WUA8 353 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 TMEM167BQ9NRX6 74 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 USF3Q68DE3 2245 aa11.37□□□□□ -0.59
PTPRE-204ENST00000455661 ZNF891A8MT65 544 aaPredicted RBP11.36□□□□□ -0.59
PTPRE-204ENST00000455661 BMPR1BO00238 502 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 TOMM40O96008 361 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 CA2P00918 260 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 APCSP02743 223 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 CRYBB3P26998 211 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 SLC35B1P78383 322 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 FOXF2Q12947 444 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 ZNF766Q5HY98 468 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 SPINK14Q6IE38 97 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 DOLPP1Q86YN1 238 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 SPEM1Q8N4L4 309 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 COQ2Q96H96 371 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 FAM173AQ9BQD7 235 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 RNASE7Q9H1E1 156 aaKnown RBP11.36□□□□□ -0.59
PTPRE-204ENST00000455661 HES4Q9HCC6 221 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 K7EP13 123 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 SPINT2O43291 252 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 DUTP33316 252 aaKnown RBP11.36□□□□□ -0.59
PTPRE-204ENST00000455661 SSTR5P35346 364 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 TCL1AP56279 114 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 FXYD3Q14802 87 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 FAM19A2Q8N3H0 131 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 RFESDQ8TAC1 157 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 CORO2AQ92828 525 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 SLC25A10Q9UBX3 287 aaPredicted RBP11.36□□□□□ -0.59
PTPRE-204ENST00000455661 CDC42EP3Q9UKI2 254 aa11.36□□□□□ -0.59
PTPRE-204ENST00000455661 ISLRO14498 428 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 ADH4P08319 380 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 CELA3AP09093 270 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 PSG5Q15238 335 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 MORN2Q502X0 79 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 MRPL54Q6P161 138 aaKnown RBP11.35□□□□□ -0.59
PTPRE-204ENST00000455661 TIPARPQ7Z3E1 657 aaKnown RBP11.35□□□□□ -0.59
PTPRE-204ENST00000455661 ZNF331Q9NQX6 463 aaPredicted RBP11.35□□□□□ -0.59
PTPRE-204ENST00000455661 SERTAD4Q9NUC0 356 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 MRPL27Q9P0M9 148 aaKnown RBP11.35□□□□□ -0.59
PTPRE-204ENST00000455661 CDKN1BP46527 198 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
PTPRE-204ENST00000455661 UNQ5815/PRO19632Q6UWF5 114 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 VASH2Q86V25 355 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 PNKDQ8N490 385 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 BCL2L2Q92843 193 aaPredicted RBP11.35□□□□□ -0.59
PTPRE-204ENST00000455661 CDX2Q99626 313 aaPredicted RBP11.35□□□□□ -0.59
PTPRE-204ENST00000455661 C12orf49Q9H741 205 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 OBP2BQ9NPH6 170 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 FSCN3Q9NQT6 498 aa11.35□□□□□ -0.59
PTPRE-204ENST00000455661 IGHV2-26A0A0B4J1V2 119 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 TRGV8A0A0C4DH27 118 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.34□□□□□ -0.59
PTPRE-204ENST00000455661 WNT9BO14905 357 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 SMPD2O60906 423 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 USF1P22415 310 aaPredicted RBP11.34□□□□□ -0.59
PTPRE-204ENST00000455661 SELENOVP59797 346 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 LYSMD4Q5XG99 296 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 TRAT1Q6PIZ9 186 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 ATOH7Q8N100 152 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 OR13A1Q8NGR1 328 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 C1orf159Q96HA4 380 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 ALKBH7Q9BT30 221 aaPredicted RBP11.34□□□□□ -0.59
PTPRE-204ENST00000455661 ENY2Q9NPA8 101 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 TCF19Q9Y242 345 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 LOXL2Q9Y4K0 774 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 SMIM27A0A1W2PRY6 76 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 IZUMO1RA6ND01 250 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 ACTL6BO94805 426 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 TNFSF15O95150 251 aa11.34□□□□□ -0.59
PTPRE-204ENST00000455661 MGST1P10620 155 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms