RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 IL4I1Q96RQ9 567 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 CST9LQ9H4G1 147 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 WDR76Q9H967 626 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 WFDC1Q9HC57 220 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 SS18L2Q9UHA2 77 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 HHLA2Q9UM44 414 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 ORC6Q9Y5N6 252 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 TENM3Q9P273 2699 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 PSMB11A5LHX3 300 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 ANKRD30BLA7E2S9 258 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 PPP5D1E7EU14 171 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 FABP7O15540 132 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 TPST2O60704 377 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 UPK3AO75631 287 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 NDUFA7O95182 113 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 TSPAN13O95857 204 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 GCGP01275 180 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 NMBP08949 121 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 GIPP09681 153 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 GKN3PP0CG01 181 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 PPIAL4GP0DN37 164 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 MGMTP16455 207 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 TIA1P31483 386 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 BRS3P32247 399 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 CRYBB2P43320 205 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 CRISP1P54107 249 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 TAS2R43P59537 309 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 S100A10P60903 97 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 RPL32P62910 135 aaKnown RBP3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 LCN2P80188 198 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 PAX5Q02548 391 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 LTC4SQ16873 150 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 KPRPQ5T749 579 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 FAM78BQ5VT40 261 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMEM225Q6GV28 225 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 FAM71F2Q6NXP2 309 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF705AQ6ZN79 300 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMEM182Q6ZP80 229 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 AAED1Q7RTV5 226 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 C6orf120Q7Z4R8 191 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 LINC01551Q86U37 167 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 LAX1Q8IWV1 398 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 DEFB107AQ8IZN7 70 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 SMIM20Q8N5G0 67 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 SLC26A10Q8NG04 563 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR51S1Q8NGJ8 323 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR13G1Q8NGZ3 307 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF563Q8TA94 476 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 ARL11Q969Q4 196 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 MCHR2Q969V1 340 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 DDIT4LQ96D03 193 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 MALSU1Q96EH3 234 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 ITCHQ96J02 903 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 SMIM8Q96KF7 97 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR7D2Q96RA2 312 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF649Q9BS31 505 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 FAAP24Q9BTP7 215 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 PBDC1Q9BVG4 233 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 SLIRPQ9GZT3 109 aaKnown RBP3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 TLNRD1Q9H1K6 362 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMEM27Q9HBJ8 222 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 ACER3Q9NUN7 267 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 NECAP2Q9NVZ3 263 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 RAB22AQ9UL26 194 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 CARHSP1Q9Y2V2 147 aaKnown RBP3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 FLVCR1Q9Y5Y0 555 aa3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 TET2Q6N021 2002 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P5-201ENST00000428894 TRAV8-7A0A075B6U6 113 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 IGHV2OR16-5A0A0B4J2B6 119 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 EXOC1LA0A1B0GW35 172 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 FAM159BA6NKW6 160 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 CLDN24A6NM45 220 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 CCL25O15444 150 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 RS1O15537 224 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 SC5DO75845 299 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 SCGNO76038 276 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 PRB2P02812 416 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR5AC1P0C628 307 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 UBBP0CG47 229 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 PMCHP20382 165 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 FUT3P21217 361 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 FASP25445 335 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 APLNRP35414 380 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 RPL29P47914 159 aaKnown RBP3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 LGALS7P47929 136 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 NPBWR2P48146 333 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 AKR1C2P52895 323 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 HCCSP53701 268 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 NDUFA6P56556 154 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 TCTAP57738 103 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR10A3P58181 314 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 PLP1P60201 277 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 PAX2Q02962 417 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF154Q13106 437 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 CEACAM7Q14002 265 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 HERPUD1Q15011 391 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 HMGN3Q15651 99 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 TNXAQ16473 311 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 BATFQ16520 125 aa3.35□□□□□ -1.87
HMGB3P5-201ENST00000428894 IQCJQ1A5X6 159 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms