RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TMEM267Q0VDI3 215 aaPredicted RBP7.27□□□□□ -1.25
PDGFC-202ENST00000422544 ASAH1Q13510 395 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 TMEM187Q14656 261 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 IZUMO4Q1ZYL8 232 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 TMEM128Q5BJH2 165 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 TCTEX1D4Q5JR98 221 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 MZT2BQ6NZ67 158 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 UNQ5815/PRO19632Q6UWF5 114 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 H2BFWTQ7Z2G1 175 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 SLC25A42Q86VD7 318 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 ZNF695Q8IW36 515 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 SELENOHQ8IZQ5 122 aaKnown RBP7.27□□□□□ -1.25
PDGFC-202ENST00000422544 CENPSQ8N2Z9 138 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 LHFPL5Q8TAF8 219 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 SRSF12Q8WXF0 261 aaKnown RBP7.27□□□□□ -1.25
PDGFC-202ENST00000422544 GALNT14Q96FL9 552 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 PHB2Q99623 299 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 CITED1Q99966 193 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 GON7Q9BXV9 100 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 ZNF580Q9UK33 172 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 TNCP24821 2201 aa7.27□□□□□ -1.25
PDGFC-202ENST00000422544 FAM240BA0A1B0GVZ2 78 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 A0A1W2PN81 502 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 TCRBV4S1A1TA0A5B7 111 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 HMX3A6NHT5 357 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 E7EUB6 86 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 SNAPC5O75971 98 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 ATG12O94817 140 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 SFT2D2O95562 160 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 TCRBP04435 133 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 ANXA3P12429 323 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 VAMP1P23763 118 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 MAS1LP35410 378 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 CHRNA7P36544 502 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 RPL27AP46776 148 aaKnown RBP7.26□□□□□ -1.25
PDGFC-202ENST00000422544 AKR1C2P52895 323 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 CRIP2P52943 208 aaPredicted RBP7.26□□□□□ -1.25
PDGFC-202ENST00000422544 CD83Q01151 205 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 PPP1R1AQ13522 171 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 AKIRIN2Q53H80 203 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 C19orf54Q5BKX5 351 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 ASPHD1Q5U4P2 390 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 TMEM268Q5VZI3 342 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 TEX38Q6PEX7 206 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 LCNL1Q6ZST4 164 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 CADM3Q8N126 398 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 MINDY2Q8NBR6 621 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 OR5T1Q8NG75 326 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 OR4X2Q8NGF9 303 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 CASTOR1Q8WTX7 329 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 RBPMSQ93062 196 aaKnown RBP7.26□□□□□ -1.25
PDGFC-202ENST00000422544 TMEM56Q96MV1 263 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 FYTTD1Q96QD9 318 aaKnown RBP7.26□□□□□ -1.25
PDGFC-202ENST00000422544 TSC22D3Q99576 134 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 CITED2Q99967 270 aaPredicted RBP7.26□□□□□ -1.25
PDGFC-202ENST00000422544 TMEM56-RWDD3S4R434 201 aa7.26□□□□□ -1.25
PDGFC-202ENST00000422544 WNK1Q9H4A3 2382 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 TRAV6A0A075B6T7 132 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 A0A0B4J293 547 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 A0A0G2JRQ6 117 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 TEX50A0A1B0GTY4 177 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 A0A1B0GW64 132 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 CGB1A6NKQ9 187 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 DBX1A6NMT0 343 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 SOX15O60248 233 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 IGHG4P01861 327 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 P0C879 139 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 OR2B8PP59922 312 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 FOXE3Q13461 319 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 ANKRD55Q3KP44 614 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 KHDC1LQ5JSQ8 128 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 LGI3Q8N145 548 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 COMMD1Q8N668 190 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 OR4A16Q8NH70 328 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 RNASE11Q8TAA1 199 aaKnown RBP7.25□□□□□ -1.25
PDGFC-202ENST00000422544 RRNAD1Q96FB5 475 aaKnown RBP7.25□□□□□ -1.25
PDGFC-202ENST00000422544 SPIN2AQ99865 258 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 SPIN2BQ9BPZ2 258 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 COMMD5Q9GZQ3 224 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 C20orf85Q9H1P6 137 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 KLK15Q9H2R5 256 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 PRNDQ9UKY0 176 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 FOXA2Q9Y261 457 aaPredicted RBP7.25□□□□□ -1.25
PDGFC-202ENST00000422544 OR51B2Q9Y5P1 312 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 DNAH9Q9NYC9 4486 aa7.25□□□□□ -1.25
PDGFC-202ENST00000422544 A0A1W2PRX2 142 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 C9orf170A2RU37 121 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 TEX22C9J3V5 150 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 RBMXL2O75526 392 aaKnown RBP7.24□□□□□ -1.25
PDGFC-202ENST00000422544 IGLV1-40P01703 118 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 RPLP1P05386 114 aaKnown RBP7.24□□□□□ -1.25
PDGFC-202ENST00000422544 ELANEP08246 267 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 FGF2P09038 288 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 H2AFB2P0C5Z0 115 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 OR4E1P0C645 316 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 PF4V1P10720 104 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 PSMB8P28062 276 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 RAB25P57735 213 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 DEFA1P59665 94 aa7.24□□□□□ -1.25
PDGFC-202ENST00000422544 DEFA3P59666 94 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms