RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 GNB1P62873 340 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 STPG3Q8N7X2 389 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 ABHD5Q8WTS1 349 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 FKBP11Q9NYL4 201 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 COX7A2P2O60397 106 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 OR4X1Q8NH49 305 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 FRYLO94915 3013 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 CELSR3Q9NYQ7 3312 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 OR1P1Q8NH06 330 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 HES4Q9HCC6 221 aa12.4□□□□□ -0.42
UBE2D4-201ENST00000222402 IGHV2-5P01817 119 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 IL6RP08887 468 aaPredicted RBP12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 OR4A8P0C604 315 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 OR10J4P0C629 311 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 WFIKKN1Q96NZ8 548 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 TRGV8A0A0C4DH27 118 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 CD40P25942 277 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 TNCP24821 2201 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 WNK2Q9Y3S1 2297 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 TNFSF13O75888 250 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 SOD3P08294 240 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 IL3RAP26951 378 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 ZNF474Q6S9Z5 364 aaPredicted RBP12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 TREML4Q6UXN2 200 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 FLYWCH2Q96CP2 140 aaKnown RBP12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 PARD6AQ9NPB6 346 aa12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 TECRQ9NZ01 308 aaKnown RBP12.39□□□□□ -0.43
UBE2D4-201ENST00000222402 IGFBP2P18065 325 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 PLA2G5P39877 138 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 TCL1AP56279 114 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 PRR27Q6MZM9 219 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 FAM90A1Q86YD7 464 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 ZNF295-AS1Q8N0V1 137 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 SFXN3Q9BWM7 321 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 TMEM242Q9NWH2 141 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 TRBV24-1A0A075B6N3 115 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 SCO2A0A1W2PP80 73 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 APELAP0DMC3 54 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 SUMO1P63165 101 aaKnown RBP12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 ASCL3Q9NQ33 180 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 PPIAL4EA0A075B759 164 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 PPIAL4DF5H284 164 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 FCN1O00602 326 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 PPIHO43447 177 aaKnown RBP12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 IGHV3-48P01763 117 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 PPIAL4FP0DN26 164 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 GCHFRP30047 84 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 CHRNB4P30926 498 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 SRP14P37108 136 aaKnown RBP12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 FOXC1Q12948 553 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 AKAP6Q13023 2319 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 GAMTQ14353 236 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 PYY3Q5JQD4 70 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 TMEM167BQ9NRX6 74 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 PPIAL4AQ9Y536 164 aa12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 CHD3Q12873 2000 aaKnown RBP12.38□□□□□ -0.43
UBE2D4-201ENST00000222402 ZNF729A6NN14 1252 aaPredicted RBP12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 VENTXO95231 258 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 C1QTNF9P0C862 333 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 MYOD1P15172 320 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 GATA2P23769 480 aaPredicted RBP12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 UBE2L3P68036 154 aaKnown RBP12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 DERL1Q9BUN8 251 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 CNN1P51911 297 aaKnown RBP12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 CT45A1Q5HYN5 189 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 OR1L8Q8NGR8 309 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 CT45A3Q8NHU0 189 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 FAM122AQ96E09 287 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 ZNF714Q96N38 554 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 IL19Q9UHD0 177 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 IGHV3-72A0A0B4J1Y9 119 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 HELTA6NFD8 242 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 RBFOX2O43251 390 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 VMA21Q3ZAQ7 101 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 KRTCAP3Q53RY4 240 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 A0A087X0M5 115 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 A0A1B0GX30 115 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 MISP3Q96FF7 219 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 GGTLC1Q9BX51 225 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 PARD6GQ9BYG4 376 aaPredicted RBP12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 DMRT1Q9Y5R6 373 aa12.37□□□□□ -0.43
UBE2D4-201ENST00000222402 C15orf61A6NNL5 157 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 HIST3H2BBQ8N257 126 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 C5orf30Q96GV9 206 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 NABP2Q9BQ15 211 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 NAT8BQ9UHF3 227 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 MBD3L4A6NDZ8 208 aaPredicted RBP12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 MBD3L3A6NE82 208 aaPredicted RBP12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 MBD3L5A6NJ08 208 aaPredicted RBP12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 C15orf65H3BRN8 121 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 IGHV1-46P01743 117 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 CCL3L1P16619 93 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 MOB3BQ86TA1 216 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 TGIF2LYQ8IUE0 185 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 TGIF2LXQ8IUE1 241 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 MBD3L2Q8NHZ7 208 aaPredicted RBP12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 SFRP2Q96HF1 295 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 MS4A10Q96PG2 267 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 TXNDC17Q9BRA2 123 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 SLC35B1P78383 322 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms