RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 ZFAND1Q8TCF1 268 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 PRRT1Q99946 306 aa13.48□□□□□ -0.25
MRPL28-201ENST00000199706 TRBV9A0A0B4J1U6 114 aa13.47□□□□□ -0.25
MRPL28-201ENST00000199706 DISC1C4P0D8 188 aa13.47□□□□□ -0.25
MRPL28-201ENST00000199706 CRYGCP07315 174 aa13.47□□□□□ -0.25
MRPL28-201ENST00000199706 ETV6P41212 452 aa13.47□□□□□ -0.25
MRPL28-201ENST00000199706 C10orf55Q5SWW7 151 aa13.47□□□□□ -0.25
MRPL28-201ENST00000199706 HSD17B13Q7Z5P4 300 aaPredicted RBP13.47□□□□□ -0.25
MRPL28-201ENST00000199706 DMBX1Q8NFW5 382 aa13.47□□□□□ -0.25
MRPL28-201ENST00000199706 HRASLSQ9HDD0 168 aa13.47□□□□□ -0.25
MRPL28-201ENST00000199706 COA4Q9NYJ1 87 aa13.47□□□□□ -0.25
MRPL28-201ENST00000199706 ZMAT5Q9UDW3 170 aaKnown RBP13.47□□□□□ -0.25
MRPL28-201ENST00000199706 V9GYH0 126 aa13.47□□□□□ -0.25
MRPL28-201ENST00000199706 C13orf42A0A1B0GVH6 325 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 H0Y980 276 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 HSPB1P04792 205 aaKnown RBP13.46□□□□□ -0.25
MRPL28-201ENST00000199706 LPAR6P43657 344 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 OR2B8PP59922 312 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 SSX9Q7RTT3 188 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 CCDC190Q86UF4 302 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 C1QL4Q86Z23 238 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 CCDC71LQ8N9Z2 235 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 NECAP1Q8NC96 275 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 OR4C16Q8NGL9 310 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 CASTOR1Q8WTX7 329 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 DPF1Q92782 380 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 MS4A10Q96PG2 267 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 DUX3Q96PT4 197 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 TSC22D3Q99576 134 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 COMMD5Q9GZQ3 224 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 ZNF355PQ9NSJ1 428 aa13.46□□□□□ -0.25
MRPL28-201ENST00000199706 A0A1B0GW64 132 aa13.45□□□□□ -0.26
MRPL28-201ENST00000199706 LINC01619G3V211 115 aa13.45□□□□□ -0.26
MRPL28-201ENST00000199706 DHFRP00374 187 aa13.45□□□□□ -0.26
MRPL28-201ENST00000199706 CTSDP07339 412 aaPredicted RBP13.45□□□□□ -0.26
MRPL28-201ENST00000199706 PGAM2P15259 253 aa13.45□□□□□ -0.26
MRPL28-201ENST00000199706 INSL3P51460 131 aa13.45□□□□□ -0.26
MRPL28-201ENST00000199706 PIGPP57054 158 aa13.45□□□□□ -0.26
MRPL28-201ENST00000199706 PDLIM3Q53GG5 364 aaPredicted RBP13.45□□□□□ -0.26
MRPL28-201ENST00000199706 ZNF343Q6P1L6 599 aa13.45□□□□□ -0.26
MRPL28-201ENST00000199706 TRIM63Q969Q1 353 aa13.45□□□□□ -0.26
MRPL28-201ENST00000199706 MRGPRFQ96AM1 343 aa13.45□□□□□ -0.26
MRPL28-201ENST00000199706 ZP3P21754 424 aa13.44□□□□□ -0.26
MRPL28-201ENST00000199706 PSMB6P28072 239 aa13.44□□□□□ -0.26
MRPL28-201ENST00000199706 AP3S2P59780 193 aa13.44□□□□□ -0.26
MRPL28-201ENST00000199706 FOXB2Q5VYV0 432 aa13.44□□□□□ -0.26
MRPL28-201ENST00000199706 OR13C8Q8NGS7 320 aa13.44□□□□□ -0.26
MRPL28-201ENST00000199706 OR5B3Q8NH48 314 aa13.44□□□□□ -0.26
MRPL28-201ENST00000199706 QTRT1Q9BXR0 403 aaKnown RBP13.44□□□□□ -0.26
MRPL28-201ENST00000199706 RANGRFQ9HD47 186 aaPredicted RBP13.44□□□□□ -0.26
MRPL28-201ENST00000199706 FKBP11Q9NYL4 201 aa13.44□□□□□ -0.26
MRPL28-201ENST00000199706 PRNDQ9UKY0 176 aa13.44□□□□□ -0.26
MRPL28-201ENST00000199706 IGLC7A0M8Q6 106 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 DPPA5A6NC42 116 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 CGB1A6NKQ9 187 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 E7EUB6 86 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 ATG12O94817 140 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 KRASP01116 189 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 SERPINE2P07093 398 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 HIST1H1BP16401 226 aaKnown RBP13.43□□□□□ -0.26
MRPL28-201ENST00000199706 CTRB1P17538 263 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 PPP5CP53041 499 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 RHOGP84095 191 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 ZNF45Q02386 682 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 ZNF79Q15937 498 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 SCGB2B2Q4G0G5 96 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 SPANXN2Q5MJ10 180 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 C9orf66Q5T8R8 295 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 CTRB2Q6GPI1 263 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 OR1L8Q8NGR8 309 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 SEC22AQ96IW7 307 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 FYTTD1Q96QD9 318 aaKnown RBP13.43□□□□□ -0.26
MRPL28-201ENST00000199706 OR5B12Q96R08 314 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 THAP7Q9BT49 309 aaPredicted RBP13.43□□□□□ -0.26
MRPL28-201ENST00000199706 TMEM14BQ9NUH8 114 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 COPZ2Q9P299 210 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 SCP2D1Q9UJQ7 156 aa13.43□□□□□ -0.26
MRPL28-201ENST00000199706 IGHV4OR15-8A0A075B7B6 117 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 A0A087WW49 117 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 TRAV3A0A0B4J244 114 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 SNAPC5O75971 98 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 IGHV3-11P01762 117 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 APELAP0DMC3 54 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 UCP1P25874 307 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 FAUP35544 74 aaKnown RBP13.42□□□□□ -0.26
MRPL28-201ENST00000199706 G6PCP35575 357 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 RAB25P57735 213 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 Q8N402 240 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 GDPD1Q8N9F7 314 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 MARCH1Q8TCQ1 289 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 SCGB3A2Q96PL1 93 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 ALX4Q9H161 411 aaPredicted RBP13.42□□□□□ -0.26
MRPL28-201ENST00000199706 AKIP1Q9NQ31 210 aa13.42□□□□□ -0.26
MRPL28-201ENST00000199706 C14orf166Q9Y224 244 aaKnown RBP13.42□□□□□ -0.26
MRPL28-201ENST00000199706 TGP01266 2768 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 C3orf85A0A1B0GTC6 90 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 HMX3A6NHT5 357 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 C15orf61A6NNL5 157 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 OVOL1O14753 267 aa13.41□□□□□ -0.26
MRPL28-201ENST00000199706 IGKV1-39P01597 117 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms