RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 AURKAIP1Q9NWT8 199 aaPredicted RBP16.68■□□□□ 0.26
SYNGAP1-227ENST00000638142 MDFIC2A0A1B0GVS7 189 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 RRHO14718 337 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 YPEL1O60688 119 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 CECR9P0C854 216 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 TEX38Q6PEX7 206 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 TMPRSS7Q7RTY8 843 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 Q8TCH9 128 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 YPEL2Q96QA6 119 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 MS4A5Q9H3V2 200 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 FZR1Q9UM11 496 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 A0A1B0GWJ7 208 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 M0R1X1 148 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 GFRA3O60609 400 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 TNFSF10P50591 281 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 TRIP6Q15654 476 aaKnown RBP16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 MBNL2Q5VZF2 373 aaKnown RBP16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 FAM90A1Q86YD7 464 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 ZNF114Q8NC26 417 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 SGMS2Q8NHU3 365 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 SNHG12Q9BXW3 62 aa16.67■□□□□ 0.26
SYNGAP1-227ENST00000638142 KIR2DL5BA0A0G2JN68 375 aa16.66■□□□□ 0.26
SYNGAP1-227ENST00000638142 KIR2DL5BA0A0G2JPC4 375 aa16.66■□□□□ 0.26
SYNGAP1-227ENST00000638142 RELBQ01201 579 aa16.66■□□□□ 0.26
SYNGAP1-227ENST00000638142 KIR2DL5AQ8N109 375 aa16.66■□□□□ 0.26
SYNGAP1-227ENST00000638142 ELOVL5Q9NYP7 299 aa16.66■□□□□ 0.26
SYNGAP1-227ENST00000638142 KNTC1P50748 2209 aa16.66■□□□□ 0.26
SYNGAP1-227ENST00000638142 KIR2DS2P43631 304 aa16.65■□□□□ 0.26
SYNGAP1-227ENST00000638142 CR1LQ2VPA4 569 aa16.65■□□□□ 0.26
SYNGAP1-227ENST00000638142 CELSR3Q9NYQ7 3312 aa16.65■□□□□ 0.26
SYNGAP1-227ENST00000638142 TRBV20OR9-2A0A075B6H5 130 aa16.65■□□□□ 0.26
SYNGAP1-227ENST00000638142 SCGB1D1O95968 90 aa16.65■□□□□ 0.26
SYNGAP1-227ENST00000638142 KIR2DL2P43627 348 aaPredicted RBP16.65■□□□□ 0.26
SYNGAP1-227ENST00000638142 SOX8P57073 446 aa16.65■□□□□ 0.26
SYNGAP1-227ENST00000638142 MIC13Q5XKP0 118 aa16.65■□□□□ 0.26
SYNGAP1-227ENST00000638142 PPP1R35Q8TAP8 253 aa16.65■□□□□ 0.26
SYNGAP1-227ENST00000638142 SDSLQ96GA7 329 aa16.65■□□□□ 0.26
SYNGAP1-227ENST00000638142 TRGV8A0A0C4DH27 118 aa16.64■□□□□ 0.26
SYNGAP1-227ENST00000638142 PGPEP1LA6NFU8 196 aa16.64■□□□□ 0.26
SYNGAP1-227ENST00000638142 M0R143 59 aa16.64■□□□□ 0.26
SYNGAP1-227ENST00000638142 DHRS13Q6UX07 377 aa16.64■□□□□ 0.26
SYNGAP1-227ENST00000638142 C1orf174Q8IYL3 243 aa16.64■□□□□ 0.26
SYNGAP1-227ENST00000638142 S1PR3Q99500 378 aa16.64■□□□□ 0.26
SYNGAP1-227ENST00000638142 NAGKQ9UJ70 344 aa16.64■□□□□ 0.26
SYNGAP1-227ENST00000638142 LSM4Q9Y4Z0 139 aaKnown RBP16.64■□□□□ 0.26
SYNGAP1-227ENST00000638142 MGST3O14880 152 aa16.64■□□□□ 0.25
SYNGAP1-227ENST00000638142 IGLV1-44P01699 117 aa16.64■□□□□ 0.25
SYNGAP1-227ENST00000638142 NPVFQ9HCQ7 196 aa16.64■□□□□ 0.25
SYNGAP1-227ENST00000638142 TMEM140Q9NV12 185 aa16.64■□□□□ 0.25
SYNGAP1-227ENST00000638142 POLR3KQ9Y2Y1 108 aaPredicted RBP16.64■□□□□ 0.25
SYNGAP1-227ENST00000638142 FRYQ5TBA9 3013 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 IGKV1D-17A0A075B6S4 117 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 SRRM5B3KS81 715 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 OR10J1P30954 320 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 YPEL3P61236 119 aaPredicted RBP16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 HES3Q5TGS1 186 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 VWA1Q6PCB0 445 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 VKORC1L1Q8N0U8 176 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 PLPPR2Q96GM1 343 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 TMEM204Q9BSN7 226 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 FAM234AQ9H0X4 552 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 TCF19Q9Y242 345 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 TECTAO75443 2155 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 HCFC1P51610 2035 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 IGHV2OR16-5A0A0B4J2B6 119 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 SCO2A0A1W2PP80 73 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 F2RL2O00254 374 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 TIMP3P35625 211 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 RPL39P5Q59GN2 51 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 ABHD12Q8N2K0 398 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 TMEM256Q8N2U0 113 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 IFI27L2Q9H2X8 130 aa16.63■□□□□ 0.25
SYNGAP1-227ENST00000638142 CUL9Q8IWT3 2517 aa16.62■□□□□ 0.25
SYNGAP1-227ENST00000638142 LOXL3P58215 753 aa16.62■□□□□ 0.25
SYNGAP1-227ENST00000638142 OR10G8Q8NGN5 311 aa16.62■□□□□ 0.25
SYNGAP1-227ENST00000638142 WFIKKN1Q96NZ8 548 aa16.62■□□□□ 0.25
SYNGAP1-227ENST00000638142 CBLN4Q9NTU7 201 aa16.62■□□□□ 0.25
SYNGAP1-227ENST00000638142 DUSP13Q9UII6 198 aa16.62■□□□□ 0.25
SYNGAP1-227ENST00000638142 TRAV9-1A0A075B6T8 112 aa16.62■□□□□ 0.25
SYNGAP1-227ENST00000638142 RAB4AP20338 218 aa16.62■□□□□ 0.25
SYNGAP1-227ENST00000638142 MS4A10Q96PG2 267 aa16.62■□□□□ 0.25
SYNGAP1-227ENST00000638142 TTC28Q96AY4 2481 aa16.62■□□□□ 0.25
SYNGAP1-227ENST00000638142 TRAV3A0A0B4J244 114 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 AQP7O14520 342 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 CDX4O14627 284 aaPredicted RBP16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 GCHFRP30047 84 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 C9orf106Q8NAJ2 232 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 OR2Z1Q8NG97 314 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 OR4S2Q8NH73 311 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 ATG101Q9BSB4 218 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 IL6RP08887 468 aaPredicted RBP16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 CFHR2P36980 270 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 RHOBP62745 196 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 OCC1Q8TAD7 63 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 DDB2Q92466 427 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 C1orf159Q96HA4 380 aa16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 YTHDF2Q9Y5A9 579 aaKnown RBP16.61■□□□□ 0.25
SYNGAP1-227ENST00000638142 IGHV1-18A0A0C4DH31 117 aa16.6■□□□□ 0.25
SYNGAP1-227ENST00000638142 C15orf61A6NNL5 157 aa16.6■□□□□ 0.25
SYNGAP1-227ENST00000638142 MT-CO2P00403 227 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms