RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 TRAV20A0A0B4J274 112 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 FAM90A26D6RGX4 464 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 SYNGR2O43760 224 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 MYOD1P15172 320 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 CNTFRP26992 372 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 SAA4P35542 130 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 RAB13P51153 203 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 RPS16P62249 146 aaKnown RBP17.59■□□□□ 0.41
USF2-216ENST00000607959 MRGPRG-AS1Q2M3A8 158 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 OR8H3Q8N146 312 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 INO80EQ8NBZ0 244 aaPredicted RBP17.59■□□□□ 0.41
USF2-216ENST00000607959 RBKSQ9H477 322 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 PAIP2BQ9ULR5 123 aaKnown RBP17.59■□□□□ 0.41
USF2-216ENST00000607959 AUP1Q9Y679 476 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 UPK2O00526 184 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 IGHV4-31P0DP07 118 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 ARHGDIBP52566 201 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 BET1LQ9NYM9 111 aa17.59■□□□□ 0.41
USF2-216ENST00000607959 TBL2Q9Y4P3 447 aaKnown RBP17.59■□□□□ 0.41
USF2-216ENST00000607959 IGHV3OR16-10A0A075B7F0 116 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 C15orf61A6NNL5 157 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 NPFFO15130 113 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 VENTXO95231 258 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 RPL12P30050 165 aaKnown RBP17.58■□□□□ 0.4
USF2-216ENST00000607959 P2RY1P47900 373 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 UBE2KP61086 200 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 SPINK9Q5DT21 86 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 RUSC1-AS1Q66K80 236 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 CLEC9AQ6UXN8 241 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 ZDHHC16Q969W1 377 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 SLA2Q9H6Q3 261 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 C7orf69Q9H7B7 122 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 TMEM14BQ9NUH8 114 aa17.58■□□□□ 0.4
USF2-216ENST00000607959 PLXNB1O43157 2135 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 A0A0D9SG52 128 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 FAM24AA6NFZ4 105 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 WRBO00258 174 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 TSC22D2O75157 780 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 IGHV4-38-2P0DP08 117 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 IAPPP10997 89 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 LGALS4P56470 323 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 TMEM249Q2WGJ8 235 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 OR4A16Q8NH70 328 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 GON7Q9BXV9 100 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 TPSG1Q9NRR2 321 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 CSPG4Q6UVK1 2322 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 IGSF23A1L1A6 192 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 ABCA1O95477 2261 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 CD24P25063 80 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 ZNF429Q86V71 674 aa17.57■□□□□ 0.4
USF2-216ENST00000607959 LYRM2Q9NU23 88 aaPredicted RBP17.57■□□□□ 0.4
USF2-216ENST00000607959 FOXA2Q9Y261 457 aaPredicted RBP17.57■□□□□ 0.4
USF2-216ENST00000607959 TEX15Q9BXT5 2789 aa17.56■□□□□ 0.4
USF2-216ENST00000607959 TRAV40A0A0B4J280 105 aa17.56■□□□□ 0.4
USF2-216ENST00000607959 IGHV1-69DA0A0B4J2H0 117 aa17.56■□□□□ 0.4
USF2-216ENST00000607959 OOSP1A8MZH6 123 aa17.56■□□□□ 0.4
USF2-216ENST00000607959 RBMXL2O75526 392 aaKnown RBP17.56■□□□□ 0.4
USF2-216ENST00000607959 IGHV1-69P01742 117 aa17.56■□□□□ 0.4
USF2-216ENST00000607959 CRYGBP07316 175 aa17.56■□□□□ 0.4
USF2-216ENST00000607959 CD1BP29016 333 aa17.56■□□□□ 0.4
USF2-216ENST00000607959 PDLIM3Q53GG5 364 aaPredicted RBP17.56■□□□□ 0.4
USF2-216ENST00000607959 KLF17Q5JT82 389 aaPredicted RBP17.56■□□□□ 0.4
USF2-216ENST00000607959 OR2C3Q8N628 320 aa17.56■□□□□ 0.4
USF2-216ENST00000607959 SNAPC5O75971 98 aa17.55■□□□□ 0.4
USF2-216ENST00000607959 KBTBD11O94819 623 aa17.55■□□□□ 0.4
USF2-216ENST00000607959 CIARTQ8N365 385 aaPredicted RBP17.55■□□□□ 0.4
USF2-216ENST00000607959 MALSU1Q96EH3 234 aa17.55■□□□□ 0.4
USF2-216ENST00000607959 RAB40CQ96S21 281 aa17.55■□□□□ 0.4
USF2-216ENST00000607959 H3BP45 60 aa17.55■□□□□ 0.4
USF2-216ENST00000607959 SLC25A17O43808 307 aa17.55■□□□□ 0.4
USF2-216ENST00000607959 LGALS7P47929 136 aa17.55■□□□□ 0.4
USF2-216ENST00000607959 TMEM167AQ8TBQ9 72 aa17.55■□□□□ 0.4
USF2-216ENST00000607959 CYTL1Q9NRR1 136 aa17.55■□□□□ 0.4
USF2-216ENST00000607959 SOX21Q9Y651 276 aaPredicted RBP17.55■□□□□ 0.4
USF2-216ENST00000607959 FLNAP21333 2647 aaKnown RBP17.54■□□□□ 0.4
USF2-216ENST00000607959 ZFHX3Q15911 3703 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 BCL2L11O43521 198 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 GPR137BO60478 399 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 TGFAP01135 160 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 GATA3P23771 443 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 NHLH2Q02577 135 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 PSG5Q15238 335 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 BRD3OSQ6XYD6 125 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 TMEM252Q8N6L7 170 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 OR52E5Q8NH55 327 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 SMIM8Q96KF7 97 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 AIFM2Q9BRQ8 373 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 TCF19Q9Y242 345 aa17.54■□□□□ 0.4
USF2-216ENST00000607959 CFDP00746 253 aaPredicted RBP17.53■□□□□ 0.4
USF2-216ENST00000607959 IGKV1D-33P01593 117 aa17.53■□□□□ 0.4
USF2-216ENST00000607959 IGKV1-33P01594 117 aa17.53■□□□□ 0.4
USF2-216ENST00000607959 PVALBP20472 110 aaPredicted RBP17.53■□□□□ 0.4
USF2-216ENST00000607959 CAV2P51636 162 aa17.53■□□□□ 0.4
USF2-216ENST00000607959 SPCS3P61009 180 aa17.53■□□□□ 0.4
USF2-216ENST00000607959 VAMP2P63027 116 aa17.53■□□□□ 0.4
USF2-216ENST00000607959 EWSR1Q01844 656 aaKnown RBP eCLIP17.53■□□□□ 0.46e-6■■■□□ 17.2
USF2-216ENST00000607959 PJVKQ0ZLH3 352 aa17.53■□□□□ 0.4
USF2-216ENST00000607959 FOXC2Q99958 501 aa17.53■□□□□ 0.4
USF2-216ENST00000607959 WSB1Q9Y6I7 421 aa17.53■□□□□ 0.4
USF2-216ENST00000607959 F2RL1P55085 397 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms