RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 LINC00527Q9UJ94 153 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 FLVCR2Q9UPI3 526 aa11.48□□□□□ -0.57
NPLOC4-209ENST00000572760 TRAV6A0A075B6T7 132 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 IGHV7-81A0A0B4J1V7 117 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 LINC01548A6NM66 108 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 SNAPC5O75971 98 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 UCP1P25874 307 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 SLC6A1P30531 599 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 PJVKQ0ZLH3 352 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 FXYD3Q14802 87 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 POU2AF1Q16633 256 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 ZNF562Q6V9R5 426 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 H2BFWTQ7Z2G1 175 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 PUSL1Q8N0Z8 303 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 KLHDC1Q8N7A1 406 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 C3orf56Q8N813 242 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 OR4A5Q8NH83 315 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 TMEM167AQ8TBQ9 72 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 CHPT1Q8WUD6 406 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 GALNT14Q96FL9 552 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 MDFIQ99750 246 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 TMEM222Q9H0R3 208 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 C20orf85Q9H1P6 137 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 ZNF430Q9H8G1 570 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 BET1LQ9NYM9 111 aa11.47□□□□□ -0.57
NPLOC4-209ENST00000572760 UPK2O00526 184 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 ATP6V0E1O15342 81 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 VDAC1P21796 283 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 COMPP49747 757 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 RAB25P57735 213 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 UBE2MP61081 183 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 RPL8P62917 257 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 SLC35B1P78383 322 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 SRPXP78539 464 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 TMEM267Q0VDI3 215 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 C4orf46Q504U0 113 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 TMEM268Q5VZI3 342 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 SLC25A42Q86VD7 318 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 STPG2Q8N412 459 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 GRPEL2Q8TAA5 225 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 CASTOR1Q8WTX7 329 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 GLYATL2Q8WU03 294 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 ARPC1AQ92747 370 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 RRNAD1Q96FB5 475 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 NOL4LQ96MY1 436 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 PHB2Q99623 299 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 GON7Q9BXV9 100 aa11.46□□□□□ -0.57
NPLOC4-209ENST00000572760 COL6A5A8TX70 2615 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 PIGBOS1A0A0B4J2F0 54 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 PSMB11A5LHX3 300 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 RBMXL2O75526 392 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 SFT2D2O95562 160 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 CDS2O95674 445 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 H2AFB2P0C5Z0 115 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 ANXA7P20073 488 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 MAS1LP35410 378 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 PROK1P58294 105 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 PPP1R1AQ13522 171 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 TMEM187Q14656 261 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 ECSCRQ19T08 205 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 LGI3Q8N145 548 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 OR4A16Q8NH70 328 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 SEC22AQ96IW7 307 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 FAM103A1Q9BTL3 118 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 NUDT15Q9NV35 164 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 NUBP2Q9Y5Y2 271 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 WSB1Q9Y6I7 421 aa11.45□□□□□ -0.58
NPLOC4-209ENST00000572760 TRAV41A0A0B4J266 112 aa11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 IGKV1-39P01597 117 aa11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 IGKV1D-39P04432 117 aa11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 IGF1P05019 195 aa11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 OR4E1P0C645 316 aa11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 HLA-GP17693 338 aa11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 RPL27AP46776 148 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 SUPT4H1P63272 117 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 UNQ5815/PRO19632Q6UWF5 114 aa11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 SELENOHQ8IZQ5 122 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 SRSF12Q8WXF0 261 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 RBPMSQ93062 196 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 FYTTD1Q96QD9 318 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 COMMD5Q9GZQ3 224 aa11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 PRR13Q9NZ81 148 aa11.44□□□□□ -0.58
NPLOC4-209ENST00000572760 TRAV3A0A0B4J244 114 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 HLA-AP01891 365 aaKnown RBP11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 OPN1MWP04001 364 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 OR9G9P0C7N8 305 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 OPN1MW2P0DN77 364 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 OPN1MW3P0DN78 364 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 NDPQ00604 133 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 PLET1Q6UQ28 207 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 NRARPQ7Z6K4 114 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 ZNF329Q86UD4 541 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 LFNGQ8NES3 379 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 OR5AU1Q8NGC0 362 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 OR4X2Q8NGF9 303 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 SGMS2Q8NHU3 365 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 LHFPL5Q8TAF8 219 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 IL22RA2Q969J5 263 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 TMEM56Q96MV1 263 aa11.43□□□□□ -0.58
NPLOC4-209ENST00000572760 WNT10AQ9GZT5 417 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms