RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ZNF506Q5JVG8 444 aa14.83□□□□□ -0.03
SMPD3-211ENST00000568373 PRORYQ9H606 182 aa14.83□□□□□ -0.03
SMPD3-211ENST00000568373 TMEM14BQ9NUH8 114 aa14.83□□□□□ -0.03
SMPD3-211ENST00000568373 FOXA2Q9Y261 457 aaPredicted RBP14.83□□□□□ -0.03
SMPD3-211ENST00000568373 COL6A6A6NMZ7 2263 aa14.83□□□□□ -0.04
SMPD3-211ENST00000568373 EPG5Q9HCE0 2579 aa14.83□□□□□ -0.04
SMPD3-211ENST00000568373 IFNA10P01566 189 aa14.83□□□□□ -0.04
SMPD3-211ENST00000568373 RAB39BQ96DA2 213 aa14.83□□□□□ -0.04
SMPD3-211ENST00000568373 SLC35D1Q9NTN3 355 aa14.83□□□□□ -0.04
SMPD3-211ENST00000568373 MDKP21741 143 aaPredicted RBP14.82□□□□□ -0.04
SMPD3-211ENST00000568373 TFF3Q07654 80 aa14.82□□□□□ -0.04
SMPD3-211ENST00000568373 ICAM4Q14773 271 aa14.82□□□□□ -0.04
SMPD3-211ENST00000568373 ZNF787Q6DD87 383 aa14.82□□□□□ -0.04
SMPD3-211ENST00000568373 LCN15Q6UWW0 184 aa14.82□□□□□ -0.04
SMPD3-211ENST00000568373 SSX7Q7RTT5 188 aa14.82□□□□□ -0.04
SMPD3-211ENST00000568373 OR13D1Q8NGV5 346 aa14.82□□□□□ -0.04
SMPD3-211ENST00000568373 AIFM2Q9BRQ8 373 aa14.82□□□□□ -0.04
SMPD3-211ENST00000568373 TMEM204Q9BSN7 226 aa14.82□□□□□ -0.04
SMPD3-211ENST00000568373 IGKV1-16P04430 117 aa14.81□□□□□ -0.04
SMPD3-211ENST00000568373 HSPB1P04792 205 aaKnown RBP14.81□□□□□ -0.04
SMPD3-211ENST00000568373 HOXA1P49639 335 aaPredicted RBP14.81□□□□□ -0.04
SMPD3-211ENST00000568373 DLX6P56179 175 aa14.81□□□□□ -0.04
SMPD3-211ENST00000568373 HNF4GQ14541 408 aa14.81□□□□□ -0.04
SMPD3-211ENST00000568373 SOHLH1Q5JUK2 328 aa14.81□□□□□ -0.04
SMPD3-211ENST00000568373 ACSM6Q6P461 480 aa14.81□□□□□ -0.04
SMPD3-211ENST00000568373 NPCDR1Q9BY65 106 aa14.81□□□□□ -0.04
SMPD3-211ENST00000568373 SFTPCP11686 197 aa14.81□□□□□ -0.04
SMPD3-211ENST00000568373 HSPE1P61604 102 aaKnown RBP14.81□□□□□ -0.04
SMPD3-211ENST00000568373 TMEM155Q4W5P6 130 aa14.81□□□□□ -0.04
SMPD3-211ENST00000568373 KHDC3LQ587J8 217 aa14.81□□□□□ -0.04
SMPD3-211ENST00000568373 RPP25LQ8N5L8 163 aaKnown RBP14.81□□□□□ -0.04
SMPD3-211ENST00000568373 C8orf31Q8N9H6 132 aa14.81□□□□□ -0.04
SMPD3-211ENST00000568373 MRPL20Q9BYC9 149 aaKnown RBP14.81□□□□□ -0.04
SMPD3-211ENST00000568373 CACNA1BQ00975 2339 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 TMEM8BA6NDV4 472 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 RRHO14718 337 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 IGKV1D-33P01593 117 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 IGKV1-33P01594 117 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 IL6RP08887 468 aaPredicted RBP14.8□□□□□ -0.04
SMPD3-211ENST00000568373 SRP19P09132 144 aaKnown RBP14.8□□□□□ -0.04
SMPD3-211ENST00000568373 LY6DQ14210 128 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 AWAT1Q58HT5 328 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 ETV3LQ6ZN32 361 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 ZNF596Q8TC21 504 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 UNKLQ9H9P5 680 aaKnown RBP14.8□□□□□ -0.04
SMPD3-211ENST00000568373 GNG13Q9P2W3 67 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 LOC102723971A0A1B0GUV8 181 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 MBP02144 154 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 CD1BP29016 333 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 ABHD12Q8N2K0 398 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 LINC00311Q8N616 119 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 ZNF709Q8N972 641 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 RXFP4Q8TDU9 374 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 GGACTQ9BVM4 153 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 PRNDQ9UKY0 176 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 WDR83OSQ9Y284 106 aa14.8□□□□□ -0.04
SMPD3-211ENST00000568373 TRBV23-1A0A0A0MS06 115 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 MAP1LC3B2A6NCE7 125 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 SRRM4A7MD48 611 aaKnown RBP14.79□□□□□ -0.04
SMPD3-211ENST00000568373 LYNX1G3V0Z9 82 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 J3QR06 171 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 FSTL3O95633 263 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 APOA2P02652 100 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 LYNX1P0DP58 116 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 COL8A2P25067 703 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 PPOXP50336 477 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 FGF8P55075 233 aaPredicted RBP14.79□□□□□ -0.04
SMPD3-211ENST00000568373 AKIRIN2Q53H80 203 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 OR10X1Q8NGY0 326 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 TMEM170AQ8WVE7 144 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 MAP1LC3BQ9GZQ8 125 aa14.79□□□□□ -0.04
SMPD3-211ENST00000568373 A0A087X0M5 115 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 A0A1B0GX30 115 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 PRSS46E5RG02 174 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 C17orf112F2Z3M2 114 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 M0R036 132 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 FFAR4Q5NUL3 377 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 FAM71F2Q6NXP2 309 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 OR5AN1Q8NGI8 311 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 OR51B2Q9Y5P1 312 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 TNCP24821 2201 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 H0YJW9 148 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 UPK2O00526 184 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 BCL2P10415 239 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 RAB11AP62491 216 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 OSR1Q8TAX0 266 aaPredicted RBP14.78□□□□□ -0.04
SMPD3-211ENST00000568373 ENY2Q9NPA8 101 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 RPS10P5Q9NQ39 176 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 SMCO4Q9NRQ5 59 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 SLC39A9Q9NUM3 307 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 ZNF257Q9Y2Q1 563 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 IGSF10Q6WRI0 2623 aa14.78□□□□□ -0.04
SMPD3-211ENST00000568373 LRBAP50851 2863 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 C7orf77A4D0Y5 90 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 ZFP92A6NM28 416 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 SNRNP70P08621 437 aaKnown RBP14.77□□□□□ -0.04
SMPD3-211ENST00000568373 IGHV1-8P0DP01 117 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 Q8N7P7 452 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 CYB561D1Q8N8Q1 229 aa14.77□□□□□ -0.04
SMPD3-211ENST00000568373 SLC24A4Q8NFF2 622 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms