RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SEPSECSQ9HD40 501 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 MRPL27Q9P0M9 148 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 IL36RNQ9UBH0 155 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 MPC1Q9Y5U8 109 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 HSBP1L1C9JCN9 74 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 C1QTNF9P0C862 333 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 TIMP3P35625 211 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 PMCHL1Q16048 86 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 C19orf35Q6ZS72 473 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 FDCSPQ8NFU4 85 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 VPS25Q9BRG1 176 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 GNB1LQ9BYB4 327 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 CLCF1Q9UBD9 225 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 TBL2Q9Y4P3 447 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 ATP23Q9Y6H3 246 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 CHD3Q12873 2000 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 OR5B21A6NL26 309 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 C17orf112F2Z3M2 114 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 IGHG3P01860 377 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 CBLN1P23435 193 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 ZNF90Q03938 601 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 SPANXN5Q5MJ07 72 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 RAB1CQ92928 201 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 NRN1Q9NPD7 142 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 PPIAL4AQ9Y536 164 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 SCTP09683 121 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 PSG2P11465 335 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 WT1P19544 449 aaPredicted RBP11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 PRRX1P54821 245 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 GNG3P63215 75 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 HLA-DRB5Q30154 266 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 WDR73Q6P4I2 378 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 UNQ5815/PRO19632Q6UWF5 114 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 Q6ZRM9 215 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 LRFN3Q9BTN0 628 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 CSTL1Q9H114 145 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 OR2W1Q9Y3N9 320 aa11.67□□□□□ -0.54
RABGGTA-220ENST00000560998 KIAA2026Q5HYC2 2103 aa11.66□□□□□ -0.54
RABGGTA-220ENST00000560998 CDC34P49427 236 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-220ENST00000560998 TBC1D28Q2M2D7 210 aa11.66□□□□□ -0.54
RABGGTA-220ENST00000560998 SPATA46Q5T0L3 261 aa11.66□□□□□ -0.54
RABGGTA-220ENST00000560998 IGFL2Q6UWQ7 119 aa11.66□□□□□ -0.54
RABGGTA-220ENST00000560998 LINC00596Q86U02 117 aa11.66□□□□□ -0.54
RABGGTA-220ENST00000560998 ZNF488Q96MN9 340 aa11.66□□□□□ -0.54
RABGGTA-220ENST00000560998 TRBV6-6A0A0A6YYG2 114 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 IGLC7A0M8Q6 106 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 CBY3A6NI87 242 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 FCN1O00602 326 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 HMGB3O15347 200 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 RBFOX2O43251 390 aaKnown RBP eCLIP11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 CELA3BP08861 270 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 IGHV1-2P23083 117 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 CA6P23280 308 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 LGALS4P56470 323 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 OCIAD2Q56VL3 154 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 MYPOPQ86VE0 399 aaPredicted RBP11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 SMIM12Q96EX1 92 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 GPHA2Q96T91 129 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 PKIBQ9C010 78 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 LIN7CQ9NUP9 197 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 LY96Q9Y6Y9 160 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 ESPL1Q14674 2120 aa11.65□□□□□ -0.54
RABGGTA-220ENST00000560998 ZNF318Q5VUA4 2279 aa11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 DPRXA6NFQ7 191 aa11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 J3QW42 95 aa11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 SIRPB1O00241 398 aa11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 S1PR2O95136 353 aa11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 NDUFB4O95168 129 aa11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 SPINK2P20155 84 aa11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 AMTP48728 403 aa11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 HINT1P49773 126 aaPredicted RBP11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 VWC2Q2TAL6 325 aa11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 TRIB1Q96RU8 372 aa11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 SFXN3Q9BWM7 321 aa11.65□□□□□ -0.55
RABGGTA-220ENST00000560998 CELSR3Q9NYQ7 3312 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 IGKV1-6A0A0C4DH72 117 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 HSPB6O14558 160 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 WISP2O76076 250 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 IGKV1-39P01597 117 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 IGKV1-5P01602 117 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 IGKV1D-39P04432 117 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 RHOBP62745 196 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 TGFBR3Q03167 851 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 TLE1Q04724 770 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 GUSBP1Q15486 140 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 LRRC10Q5BKY1 277 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 ZNF324BQ6AW86 544 aaPredicted RBP11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 FAM58AQ8N1B3 248 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 OR51H1Q8NH63 302 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 QTRT1Q9BXR0 403 aaKnown RBP11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 NPCDR1Q9BY65 106 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 CST9LQ9H4G1 147 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 GNB4Q9HAV0 340 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 RNF114Q9Y508 228 aa11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 URB1O60287 2271 aaKnown RBP11.64□□□□□ -0.55
RABGGTA-220ENST00000560998 A0A1W2PR80 420 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 NPIPB11E5RHQ5 1161 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 J3QT63 122 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 SMPD2O60906 423 aa11.63□□□□□ -0.55
RABGGTA-220ENST00000560998 ZNF324O75467 553 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms