RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, human

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-215	ENST00000558868	IGHV2-70D	A0A0C4DH43	119 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868		A1L4Q6	167 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	C15orf61	A6NNL5	157 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	LEUTX	A8MZ59	168 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	FGF2	P09038	288 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	HTR1D	P28221	377 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	LGALS7	P47929	136 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	REG1B	P48304	166 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	STPG2	Q8N412	459 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	OR5C1	Q8NGR4	320 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	RNF141	Q8WVD5	230 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	RPE	Q96AT9	228 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	HARBI1	Q96MB7	349 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	HIPK2	Q9H2X6	1198 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	ZNF257	Q9Y2Q1	563 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	INSIG2	Q9Y5U4	225 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	LRBA	P50851	2863 aa		11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	USP9Y	O00507	2555 aa	Predicted RBP	11.19	□□□□□ -0.62
TPM1-215	ENST00000558868	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	UPK2	O00526	184 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	CST7	O76096	145 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	IFNA5	P01569	189 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	IGKV1-16	P04430	117 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	ARG1	P05089	322 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	IL6R	P08887	468 aa	Predicted RBP	11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	S100A1	P23297	94 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	ZFP36	P26651	326 aa	Known RBP	11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	DYNLT3	P51808	116 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	OR2B8P	P59922	312 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	HSPE1	P61604	102 aa	Known RBP	11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	RPS16	P62249	146 aa	Known RBP	11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	ATP6V1F	Q16864	119 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	VMA21	Q3ZAQ7	101 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	SPANXN5	Q5MJ07	72 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	VKORC1L1	Q8N0U8	176 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	ZNF295-AS1	Q8N0V1	137 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	OR4P4	Q8NGL7	312 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	ATP5S	Q99766	215 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	GINS3	Q9BRX5	216 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	ENY2	Q9NPA8	101 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	TMEM14B	Q9NUH8	114 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	DPM3	Q9P2X0	92 aa		11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.18	□□□□□ -0.62
TPM1-215	ENST00000558868	OOSP1	A8MZH6	123 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	VWC2L	B2RUY7	222 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868		H3BP45	60 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	LY6L	H3BQJ8	138 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	KBTBD11	O94819	623 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	NMB	P08949	121 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	SEC11B	P0C7V7	166 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	USF1	P22415	310 aa	Predicted RBP	11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	LCN2	P80188	198 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	PAX2	Q02962	417 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	CLINT1	Q14677	625 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	TPTE2P1	Q5T6R2	138 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	CLEC9A	Q6UXN8	241 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	TMEM14EP	Q6UXP3	125 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	MOB3B	Q86TA1	216 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	PUSL1	Q8N0Z8	303 aa	Known RBP	11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	TMED6	Q8WW62	240 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	BSCL2	Q96G97	398 aa	Predicted RBP	11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	RNF5	Q99942	180 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	WFDC1	Q9HC57	220 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	SIRT7	Q9NRC8	400 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	MED9	Q9NWA0	146 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	PFDN2	Q9UHV9	154 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	TCF19	Q9Y242	345 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	OR51B2	Q9Y5P1	312 aa		11.17	□□□□□ -0.62
TPM1-215	ENST00000558868	IGHV1-3	A0A0C4DH29	117 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	ODF3B	A8MYP8	253 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	METTL15P1	P0C7V9	234 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	SAA1	P0DJI8	122 aa	Predicted RBP	11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	HOXA1	P49639	335 aa	Predicted RBP	11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	DVL1P1	P54792	670 aa	Predicted RBP	11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	ATP5I	P56385	69 aa	Predicted RBP	11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	DIAPH2-AS1	Q14236	149 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	MINOS1	Q5TGZ0	78 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	CCDC144NL	Q6NUI1	221 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	VMO1	Q7Z5L0	202 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	LILRB2	Q8N423	598 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	TMEM217	Q8N7C4	229 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	OR5B3	Q8NH48	314 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	SCGB1C1	Q8TD33	95 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	PINX1	Q96BK5	328 aa	Known RBP	11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	SIRPD	Q9H106	197 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	HEYL	Q9NQ87	328 aa	Predicted RBP	11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	MINOS1-NBL1	R4GNA1	71 aa		11.16	□□□□□ -0.62
TPM1-215	ENST00000558868	TRAV3	A0A0B4J244	114 aa		11.15	□□□□□ -0.62
TPM1-215	ENST00000558868	SRRM4	A7MD48	611 aa	Known RBP	11.15	□□□□□ -0.62
TPM1-215	ENST00000558868	FGF16	O43320	207 aa		11.15	□□□□□ -0.62
TPM1-215	ENST00000558868	TOX4	O94842	621 aa		11.15	□□□□□ -0.62
TPM1-215	ENST00000558868	SLC25A16	P16260	332 aa		11.15	□□□□□ -0.62
TPM1-215	ENST00000558868	RAB5C	P51148	216 aa		11.15	□□□□□ -0.62
TPM1-215	ENST00000558868	LGALS4	P56470	323 aa		11.15	□□□□□ -0.62
TPM1-215	ENST00000558868	RAB11A	P62491	216 aa		11.15	□□□□□ -0.62
TPM1-215	ENST00000558868	FAM74A1	Q5RGS3	127 aa		11.15	□□□□□ -0.62

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