RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 RPL31P62899 125 aaKnown RBP14.56□□□□□ -0.08
SYNE3-202ENST00000553340 LTC4SQ16873 150 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 TRAT1Q6PIZ9 186 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 WDR82Q6UXN9 313 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 TMPRSS7Q7RTY8 843 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 C20orf144Q9BQM9 153 aa14.56□□□□□ -0.08
SYNE3-202ENST00000553340 C9orf172C9J069 976 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 GFRA3O60609 400 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 TNFSF13O75888 250 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 CD33P20138 364 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 GCHFRP30047 84 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 ERVK-16P61578 105 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 SMIM21Q3B7S5 101 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 TEX43Q6ZNM6 134 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 C15orf65H3BRN8 121 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 SERF1AO75920 110 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 MT-CO2P00403 227 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 IGHV1-2P23083 117 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 TPTE2P1Q5T6R2 138 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 SSMEM1Q8WWF3 244 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 HSPB9Q9BQS6 159 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 NPVFQ9HCQ7 196 aa14.55□□□□□ -0.08
SYNE3-202ENST00000553340 SLC17A3O00476 420 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 PROP1O75360 226 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 LYZL6O75951 148 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 TDGF1P13385 188 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 LINC00310P59036 64 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 HLA-DRB5Q30154 266 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 ABHD12Q8N2K0 398 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 MIEN1Q9BRT3 115 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 DCTN5Q9BTE1 182 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 AHCTF1Q8WYP5 2266 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 K7EN84 100 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 FCN1O00602 326 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 RHOBP62745 196 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 TMEM183BQ1AE95 376 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 INO80CQ6PI98 192 aaPredicted RBP14.54□□□□□ -0.08
SYNE3-202ENST00000553340 BAGE3Q86Y29 109 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 BAGE2Q86Y30 109 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 OR5AU1Q8NGC0 362 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 OR1L6Q8NGR2 347 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 UHRF2Q96PU4 802 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 FAM234AQ9H0X4 552 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 FOXJ2Q9P0K8 574 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 GNG12Q9UBI6 72 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 PTPRBP23467 1997 aa14.54□□□□□ -0.08
SYNE3-202ENST00000553340 C9JCJ5 164 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 M0R1X1 148 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 RPLP1P05386 114 aaKnown RBP14.53□□□□□ -0.08
SYNE3-202ENST00000553340 IL6RP08887 468 aaPredicted RBP14.53□□□□□ -0.08
SYNE3-202ENST00000553340 HCFC1P51610 2035 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 EDDM3AQ14507 147 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 VKORC1L1Q8N0U8 176 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 LSM4Q9Y4Z0 139 aaKnown RBP14.53□□□□□ -0.08
SYNE3-202ENST00000553340 LY96Q9Y6Y9 160 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 COL27A1Q8IZC6 1860 aaPredicted RBP14.53□□□□□ -0.08
SYNE3-202ENST00000553340 TRGV5A0A0B4J1U4 118 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 A0A1B0GWJ7 208 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 LGALS4P56470 323 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 RELBQ01201 579 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 EFNB3Q15768 340 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 RPEL1Q2QD12 228 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 MDS2Q8NDY4 140 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 Q8TCH9 128 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 C11orf52Q96A22 123 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 PLPPR2Q96GM1 343 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 SEPSECSQ9HD40 501 aaKnown RBP14.53□□□□□ -0.08
SYNE3-202ENST00000553340 SPRR3Q9UBC9 169 aa14.53□□□□□ -0.08
SYNE3-202ENST00000553340 C21orf140B9A014 251 aa14.52□□□□□ -0.08
SYNE3-202ENST00000553340 TDRG1Q3Y452 100 aa14.52□□□□□ -0.08
SYNE3-202ENST00000553340 SAMD10Q9BYL1 202 aa14.52□□□□□ -0.08
SYNE3-202ENST00000553340 TRGV10A0A0A0MS01 117 aa14.52□□□□□ -0.09
SYNE3-202ENST00000553340 TIMM8AO60220 97 aaPredicted RBP14.52□□□□□ -0.09
SYNE3-202ENST00000553340 IER3P46695 156 aa14.52□□□□□ -0.09
SYNE3-202ENST00000553340 Q0VG73 95 aa14.52□□□□□ -0.09
SYNE3-202ENST00000553340 MORN2Q502X0 79 aa14.52□□□□□ -0.09
SYNE3-202ENST00000553340 KRTCAP3Q53RY4 240 aa14.52□□□□□ -0.09
SYNE3-202ENST00000553340 TEPPQ6URK8 271 aa14.52□□□□□ -0.09
SYNE3-202ENST00000553340 UBALD2Q8IYN6 164 aa14.52□□□□□ -0.09
SYNE3-202ENST00000553340 EAF1Q96JC9 268 aaPredicted RBP14.52□□□□□ -0.09
SYNE3-202ENST00000553340 VAMP8Q9BV40 100 aa14.52□□□□□ -0.09
SYNE3-202ENST00000553340 CD46P15529 392 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 RAB31Q13636 194 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 MMD2Q8IY49 270 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 STPG3Q8N7X2 389 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 S1PR3Q99500 378 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 TMEM140Q9NV12 185 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 JPT1Q9UK76 154 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 TCF19Q9Y242 345 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 PAM16Q9Y3D7 125 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 TRBV9A0A0B4J1U6 114 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 TRAV3A0A0B4J244 114 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 SNURFLB1AK76 121 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 CD177Q8N6Q3 437 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 VN1R17PQ8TDU5 208 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 C1orf159Q96HA4 380 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 IL17BQ9UHF5 180 aa14.51□□□□□ -0.09
SYNE3-202ENST00000553340 TRGV8A0A0C4DH27 118 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 LAMTOR5O43504 91 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 IRF2P14316 349 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms