RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 BOKQ9UMX3 212 aaPredicted RBP14.66□□□□□ -0.06
RAB40C-205ENST00000539661 YTHDF2Q9Y5A9 579 aaKnown RBP14.66□□□□□ -0.06
RAB40C-205ENST00000539661 J3QW42 95 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 SLC17A3O00476 420 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 HAND1O96004 215 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 HBZP02008 142 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 OR10J4P0C629 311 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 TDGF1P13385 188 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 HNF1AP20823 631 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 KRTDAPP60985 99 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 SPATA45Q537H7 98 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 EAF1Q96JC9 268 aaPredicted RBP14.65□□□□□ -0.06
RAB40C-205ENST00000539661 MGST2Q99735 147 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 GNB4Q9HAV0 340 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 GTF3C1Q12789 2109 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 F2Z2F3 143 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 ZNF253O75346 499 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 AREGP15514 252 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 GCHFRP30047 84 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 OR1C1Q15619 314 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 KCNS1Q96KK3 526 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 GP6Q9HCN6 339 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 TBL2Q9Y4P3 447 aaKnown RBP14.65□□□□□ -0.06
RAB40C-205ENST00000539661 ARL2-SNX15V9GYD0 113 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 V9GYV3 84 aa14.65□□□□□ -0.06
RAB40C-205ENST00000539661 PINLYPA6NC86 204 aa14.64□□□□□ -0.07
RAB40C-205ENST00000539661 RRHO14718 337 aa14.64□□□□□ -0.07
RAB40C-205ENST00000539661 CYB561P49447 251 aa14.64□□□□□ -0.07
RAB40C-205ENST00000539661 HTD2P86397 168 aa14.64□□□□□ -0.07
RAB40C-205ENST00000539661 OR52E5Q8NH55 327 aa14.64□□□□□ -0.07
RAB40C-205ENST00000539661 ORAOV1Q8WV07 137 aa14.64□□□□□ -0.07
RAB40C-205ENST00000539661 NRN1Q9NPD7 142 aa14.64□□□□□ -0.07
RAB40C-205ENST00000539661 TCF21O43680 179 aa14.64□□□□□ -0.07
RAB40C-205ENST00000539661 MT-CO3P00414 261 aa14.64□□□□□ -0.07
RAB40C-205ENST00000539661 TFPI2P48307 235 aa14.64□□□□□ -0.07
RAB40C-205ENST00000539661 CLDN18P56856 261 aa14.64□□□□□ -0.07
RAB40C-205ENST00000539661 PRSS46E5RG02 174 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 OR5G3P0C626 314 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 IGLC2P0DOY2 106 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 IGLC3P0DOY3 106 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 Q0VFX4 171 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 MMDQ15546 238 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 C21orf62-AS1Q17RA5 79 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 LINC00473A8K010 186 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 ZNF891A8MT65 544 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-205ENST00000539661 RHOBP62745 196 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 CX3CL1P78423 397 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 SRYQ05066 204 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 TRA2AQ13595 282 aaKnown RBP eCLIP14.63□□□□□ -0.07
RAB40C-205ENST00000539661 MIC13Q5XKP0 118 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 KLHDC1Q8N7A1 406 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 STARD4Q96DR4 205 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 GUCD1Q96NT3 240 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 HES4Q9HCC6 221 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 FREM1Q5H8C1 2179 aa14.63□□□□□ -0.07
RAB40C-205ENST00000539661 FAM166BA8MTA8 275 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 PSPNO60542 156 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 ZNF766Q5HY98 468 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 PPP1R32Q7Z5V6 425 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 NANOS1Q8WY41 292 aaKnown RBP14.62□□□□□ -0.07
RAB40C-205ENST00000539661 MS4A5Q9H3V2 200 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 RNF114Q9Y508 228 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 KMT2EQ8IZD2 1858 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 TECTAO75443 2155 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 C20orf202A1L168 122 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 CFIP05156 583 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 OR9G9P0C7N8 305 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 AMTP48728 403 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 PLGLB1Q02325 96 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 GABRA6Q16445 453 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 ST6GALNAC3Q8NDV1 305 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 IFI44Q8TCB0 444 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 FAM103A1Q9BTL3 118 aaKnown RBP14.62□□□□□ -0.07
RAB40C-205ENST00000539661 LAMTOR2Q9Y2Q5 125 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 LSM4Q9Y4Z0 139 aaKnown RBP14.62□□□□□ -0.07
RAB40C-205ENST00000539661 DSPP15924 2871 aaKnown RBP14.62□□□□□ -0.07
RAB40C-205ENST00000539661 VDAC2P45880 294 aaPredicted RBP14.62□□□□□ -0.07
RAB40C-205ENST00000539661 OR8I2Q8N0Y5 310 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 NPVFQ9HCQ7 196 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 FOXJ2Q9P0K8 574 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 NAT8BQ9UHF3 227 aa14.62□□□□□ -0.07
RAB40C-205ENST00000539661 MED12LQ86YW9 2145 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 AQP7O14520 342 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 HYPMO75409 117 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 HNRNPA3P51991 378 aaKnown RBP14.61□□□□□ -0.07
RAB40C-205ENST00000539661 PRRX1P54821 245 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 TMEM136Q6ZRR5 245 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 TXN2Q99757 166 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 FAM186AA6NE01 2351 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 A0A1W2PS18 150 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 NDUFB8O95169 186 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 CCL4P13236 92 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 C19orf35Q6ZS72 473 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 STPG4Q8N801 248 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 HEYLQ9NQ87 328 aaPredicted RBP14.61□□□□□ -0.07
RAB40C-205ENST00000539661 OSTCQ9NRP0 149 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 B4GALT7Q9UBV7 327 aa14.61□□□□□ -0.07
RAB40C-205ENST00000539661 USF3Q68DE3 2245 aa14.6□□□□□ -0.07
RAB40C-205ENST00000539661 ZNF324O75467 553 aaPredicted RBP14.6□□□□□ -0.07
RAB40C-205ENST00000539661 EFNB3Q15768 340 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms