RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 GPR183P32249 361 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 SSBP2P81877 361 aaPredicted RBP8.53□□□□□ -1.04
COL4A6-208ENST00000538570 ATP5G2Q06055 141 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 ZNF56Q15929 161 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 TBL2Q9Y4P3 447 aaKnown RBP8.53□□□□□ -1.04
COL4A6-208ENST00000538570 DOCK1Q14185 1865 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 NDUFA2O43678 99 aa8.52□□□□□ -1.04
COL4A6-208ENST00000538570 C1orf100Q5SVJ3 147 aa8.52□□□□□ -1.04
COL4A6-208ENST00000538570 PCSK4Q6UW60 755 aa8.52□□□□□ -1.04
COL4A6-208ENST00000538570 DLL3Q9NYJ7 618 aa8.52□□□□□ -1.04
COL4A6-208ENST00000538570 ZG16O60844 167 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 PAPPA-AS1Q5QFB9 102 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 C9orf153Q5TBE3 101 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 TMEM229AB2RXF0 380 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 ERGP11308 486 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 CBLN1P23435 193 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 TSPAN7P41732 249 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 SRSF6Q13247 344 aaKnown RBP8.52□□□□□ -1.05
COL4A6-208ENST00000538570 ZNF826PQ6ZT77 177 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 KCNK17Q96T54 332 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 ODAMA1E959 279 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 IGHV4-34P06331 123 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 HIST1H1AQ02539 215 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-208ENST00000538570 SAXO1Q8IYX7 474 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 TRAV5A0A0B4J249 113 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 PRR33A8MZF0 331 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 NPFFO15130 113 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 TIMM23BQ5SRD1 257 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 SMIM8Q96KF7 97 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 DUX5Q96PT3 197 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 SFXN3Q9BWM7 321 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 YAE1D1Q9NRH1 226 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 JPT1Q9UK76 154 aa8.52□□□□□ -1.05
COL4A6-208ENST00000538570 TRBV5-7A0A0A0MS05 114 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 SPAARA0A1B0GVQ0 90 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 AHRRA9YTQ3 701 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 ZNF501Q96CX3 271 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-208ENST00000538570 FOXC2Q99958 501 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 PMS2CLQ68D20 193 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 ORAOV1Q8WV07 137 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 DPH3Q96FX2 82 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 LOXL4Q96JB6 756 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 NPDC1Q9NQX5 325 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-208ENST00000538570 UCNP55089 124 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 OCIAD2Q56VL3 154 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 FAM74A4Q5TZK3 123 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 NR2C2APQ86WQ0 139 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 AMELYQ99218 206 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 LINC00470Q9BZP3 86 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 IGLV1-36A0A0B4J1U3 117 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 IGKV3OR2-268A0A0C4DH90 116 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 KBTBD11-OT1A0A1B0GTJ5 212 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 ZNF146Q15072 292 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 SLC25A38Q96DW6 304 aa8.51□□□□□ -1.05
COL4A6-208ENST00000538570 STRCP1A6NGW2 1772 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 A0A1W2PQM1 296 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 HBBP68871 147 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 OR2K2Q8NGT1 345 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 C5orf66Q9H5L9 145 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 TRBV20OR9-2A0A075B6H5 130 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 PATE3B3GLJ2 98 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 ITGB1BP1O14713 200 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 REG1AP05451 166 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 TFF2Q03403 129 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 GAGE13Q4V321 117 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 ZNF324BQ6AW86 544 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-208ENST00000538570 EEF1AKMT3Q96AZ1 226 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 THY1P04216 161 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 TMEM30BQ3MIR4 351 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 TMEM155Q4W5P6 130 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 COX6B1P14854 86 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 LCN2P80188 198 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 C10orf128Q5T292 105 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 GOLT1AQ6ZVE7 132 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 ABHD12Q8N2K0 398 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 NABP2Q9BQ15 211 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 THSD7AQ9UPZ6 1657 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 PPIAL4CA0A0B4J2A2 164 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 ZNHIT1O43257 154 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 PPIAL4GP0DN37 164 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 SUMO2P61956 95 aaKnown RBP8.5□□□□□ -1.05
COL4A6-208ENST00000538570 TMEM187Q14656 261 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 WDYHV1Q96HA8 205 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 PLSCR2Q9NRY7 297 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 TMEM160Q9NX00 188 aa8.5□□□□□ -1.05
COL4A6-208ENST00000538570 OR11H12B2RN74 326 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 NPPCP23582 126 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 GCHFRP30047 84 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 FUT5Q11128 374 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 OR11H1Q8NG94 326 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 OR11H2Q8NH07 326 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 TCF19Q9Y242 345 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 CELA2AP08217 269 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 SNRPD3P62318 126 aaKnown RBP8.49□□□□□ -1.05
COL4A6-208ENST00000538570 ACSF3Q4G176 576 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-208ENST00000538570 FAM159AQ6UWV7 190 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 DNM1P46Q6ZS02 220 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 NEUROG1Q92886 237 aa8.49□□□□□ -1.05
COL4A6-208ENST00000538570 ZNF414Q96IQ9 312 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms