RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 FRMD6-AS1P0C7T7 363 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 TRA2AQ13595 282 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 Q6P435 159 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 PKIBQ9C010 78 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 MS4A5Q9H3V2 200 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 ZNF331Q9NQX6 463 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 CLCF1Q9UBD9 225 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 C10orf142B7Z368 130 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 RAB29O14966 203 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 HSBP1O75506 76 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 RELQ04864 619 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 PQLC2Q6ZP29 291 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 SLC35E1Q96K37 410 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 LRFN3Q9BTN0 628 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 GNB4Q9HAV0 340 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 NRN1Q9NPD7 142 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 GVINP1Q7Z2Y8 2422 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 CRYBB3P26998 211 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 HOXC12P31275 282 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 FABP6P51161 128 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 RHOBP62745 196 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 TPTE2P1Q5T6R2 138 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 PRR27Q6MZM9 219 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 ZNF439Q8NDP4 499 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 PARD6GQ9BYG4 376 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 DEFB127Q9H1M4 99 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 ABI3Q9P2A4 366 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 WDR83OSQ9Y284 106 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 TRBV6-6A0A0A6YYG2 114 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 HELTA6NFD8 242 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 RRHO14718 337 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 SPATA31B1PQ5VZV4 182 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 ERASQ7Z444 233 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 SPEM1Q8N4L4 309 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 NHLRC2Q8NBF2 726 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 C20orf144Q9BQM9 153 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 PHF7Q9BWX1 381 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 RNASE7Q9H1E1 156 aaKnown RBP10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 FBXL7Q9UJT9 491 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 VPS13AQ96RL7 3174 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 OOEPA6NGQ2 149 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 MLNRO43193 412 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 CER1O95813 267 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 CGAP01215 116 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 OR10J4P0C629 311 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 GCHFRP30047 84 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 VAMP3Q15836 100 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 ZBTB34Q8NCN2 500 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 RNF2Q99496 336 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 UQCR10Q9UDW1 63 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 TIMM8AO60220 97 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 Q56UQ5 140 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 CENPVQ7Z7K6 275 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 KLHDC1Q8N7A1 406 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 SLC25A40Q8TBP6 338 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 FAM216AQ8WUB2 273 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 PPP1R14DQ9NXH3 145 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 TNCP24821 2201 aa10.72□□□□□ -0.69
TRAPPC9-208ENST00000520857 LINC00473A8K010 186 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 C15orf62A8K5M9 175 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 OR9G9P0C7N8 305 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 OR1C1Q15619 314 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 LPAL2Q16609 132 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 KRTAP27-1Q3LI81 207 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 TMEM144Q7Z5S9 345 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 YTHDF2Q9Y5A9 579 aaKnown RBP10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 H0Y8G0 127 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 LYZL6O75951 148 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 CELA3BP08861 270 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 CENPWQ5EE01 88 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 PRR31Q5SQ13 230 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 Q6ZVH6 145 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 TCTEX1D1Q8N7M0 179 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 S1PR3Q99500 378 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 LOXL2Q9Y4K0 774 aa10.71□□□□□ -0.69
TRAPPC9-208ENST00000520857 CACNA1GO43497 2377 aa10.71□□□□□ -0.7
TRAPPC9-208ENST00000520857 HEATR1Q9H583 2144 aaKnown RBP10.71□□□□□ -0.7
TRAPPC9-208ENST00000520857 TMPRSS2O15393 492 aa10.71□□□□□ -0.7
TRAPPC9-208ENST00000520857 COL8A2P25067 703 aa10.71□□□□□ -0.7
TRAPPC9-208ENST00000520857 TREML4Q6UXN2 200 aa10.71□□□□□ -0.7
TRAPPC9-208ENST00000520857 SEPSECSQ9HD40 501 aaKnown RBP10.71□□□□□ -0.7
TRAPPC9-208ENST00000520857 PRDM6Q9NQX0 595 aa10.71□□□□□ -0.7
TRAPPC9-208ENST00000520857 LINC00614P0C842 121 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 CAMPP49913 170 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 TRIM61Q5EBN2 209 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 RNASEKQ6P5S7 137 aaKnown RBP10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 ST6GALNAC3Q8NDV1 305 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 OR4C5Q8NGB2 326 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 SSBP3Q9BWW4 388 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 RPH3ALQ9UNE2 315 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 RNF24Q9Y225 148 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 LAMTOR2Q9Y2Q5 125 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 PATE3B3GLJ2 98 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 WNT2P09544 360 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 DCAF12Q5T6F0 453 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 LCN12Q6JVE5 192 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 TEX43Q6ZNM6 134 aa10.7□□□□□ -0.7
TRAPPC9-208ENST00000520857 CNEP1R1Q8N9A8 125 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms