RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 AQP7O14520 342 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 GFRA3O60609 400 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 CECR9P0C854 216 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 SELLP14151 372 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 CCKARP32238 428 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 ZNF134P52741 427 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 MORN2Q502X0 79 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 UTF1Q5T230 341 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 VWA1Q6PCB0 445 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 TEX38Q6PEX7 206 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 OR4A16Q8NH70 328 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 LRRC29Q8WV35 223 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 GNG12Q9UBI6 72 aa13.71□□□□□ -0.21
PCDHGA11-202ENST00000518882 M0R1X1 148 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 CD59P13987 128 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 KITLGP21583 273 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 PRDX2P32119 198 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 USF2Q15853 346 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 C1orf229Q6ZS94 237 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 FAM90A1Q86YD7 464 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 BEND2Q8NDZ0 799 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 IMMP2LQ96T52 175 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 YTHDF2Q9Y5A9 579 aaKnown RBP13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 CACNA1GO43497 2377 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 EREGO14944 169 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 MPDU1O75352 247 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 RELBQ01201 579 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 GUSBP1Q15486 140 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 PDLIM3Q53GG5 364 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 DHRS13Q6UX07 377 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 OCC1Q8TAD7 63 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 SSMEM1Q8WWF3 244 aa13.7□□□□□ -0.22
PCDHGA11-202ENST00000518882 IGKV1D-17A0A075B6S4 117 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 SOX15O60248 233 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 ADMP35318 185 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 THBS3P49746 956 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 SOX8P57073 446 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 IQCJQ1A5X6 159 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 LBHQ53QV2 105 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 TP53TG5Q9Y2B4 290 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 MDFIC2A0A1B0GVS7 189 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 FAM90A9PA6NNJ1 464 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 KIR2DL2P43627 348 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 TMPRSS3P57727 454 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 SPATA31B1PQ5VZV4 182 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 TGIF2LXQ8IUE1 241 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 TMEM178AQ8NBL3 297 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 SEPSECSQ9HD40 501 aaKnown RBP13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 FKBP11Q9NYL4 201 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 DUSP13Q9UII6 198 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 DSCAML1Q8TD84 2053 aa13.69□□□□□ -0.22
PCDHGA11-202ENST00000518882 DSCAMO60469 2012 aa13.68□□□□□ -0.22
PCDHGA11-202ENST00000518882 CXorf1O96002 111 aa13.68□□□□□ -0.22
PCDHGA11-202ENST00000518882 HOXC12P31275 282 aa13.68□□□□□ -0.22
PCDHGA11-202ENST00000518882 TIMP3P35625 211 aa13.68□□□□□ -0.22
PCDHGA11-202ENST00000518882 LOXL3P58215 753 aa13.68□□□□□ -0.22
PCDHGA11-202ENST00000518882 RAB4BP61018 213 aa13.68□□□□□ -0.22
PCDHGA11-202ENST00000518882 ZNF718Q3SXZ3 478 aa13.68□□□□□ -0.22
PCDHGA11-202ENST00000518882 IFI27L2Q9H2X8 130 aa13.68□□□□□ -0.22
PCDHGA11-202ENST00000518882 TMEM140Q9NV12 185 aa13.68□□□□□ -0.22
PCDHGA11-202ENST00000518882 LSM4Q9Y4Z0 139 aaKnown RBP13.68□□□□□ -0.22
PCDHGA11-202ENST00000518882 GRIFINA4D1Z8 144 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 K7EN84 100 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 SCGB1D1O95968 90 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 TNFSF10P50591 281 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 RPP30P78346 268 aaKnown RBP13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 HLA-DRB5Q30154 266 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 ARSJQ5FYB0 599 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 TRAT1Q6PIZ9 186 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 OR52E5Q8NH55 327 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 TCF19Q9Y242 345 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 POLR3KQ9Y2Y1 108 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 CADP27708 2225 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 IGHV3OR15-7A0A075B7D8 119 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 SPRNQ5BIV9 151 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 C9orf106Q8NAJ2 232 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 OR2Z1Q8NG97 314 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 LEAP2Q969E1 77 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 JPT1Q9UK76 154 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 TP53TG3Q9ULZ0 132 aa13.67□□□□□ -0.22
PCDHGA11-202ENST00000518882 FOXH1O75593 365 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 IL6RP08887 468 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 CD33P20138 364 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 EFNB3Q15768 340 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 MSMPQ1L6U9 139 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 ZNRF1Q8ND25 227 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 GUCD1Q96NT3 240 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 SVILO95425 2214 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 IGHV2OR16-5A0A0B4J2B6 119 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 SLC17A3O00476 420 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 CDX4O14627 284 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 YPEL1O60688 119 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 GCHFRP30047 84 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 YPEL3P61236 119 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 ERVK-16P61578 105 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 RPL31P62899 125 aaKnown RBP13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 OR10G8Q8NGN5 311 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 BTF3L4Q96K17 158 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 YPEL2Q96QA6 119 aa13.66□□□□□ -0.22
PCDHGA11-202ENST00000518882 TXNDC17Q9BRA2 123 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms