RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SFRP2Q96HF1 295 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 C20orf166-AS1Q96NR2 134 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 UHRF1BP1LA0JNW5 1464 aa2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 EPRSP07814 1512 aaKnown RBP2.62□□□□□ -1.99
HMGB1P47-201ENST00000511281 DHX57Q6P158 1386 aaKnown RBP2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 KIAA0556O60303 1618 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 TMEM235A6NFC5 223 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 ODF3BA8MYP8 253 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 EEF1E1-BLOC1S5C9J1V9 151 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 E7EQL1 145 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 INMT-MINDY4F8WBC2 141 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 LST1O00453 97 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 CHP2O43745 196 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 RPL27AP46776 148 aaKnown RBP2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 CAV1Q03135 178 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 FABP9Q0Z7S8 132 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 STX5Q13190 355 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 SRSF6Q13247 344 aaKnown RBP2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 ACOT6Q3I5F7 207 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 HIST2H3PS2Q5TEC6 136 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 OR4C16Q8NGL9 310 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 RPS4Y2Q8TD47 263 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 C12orf43Q96C57 262 aaKnown RBP2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 ANGPT4Q9Y264 503 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 UGGT2Q9NYU1 1516 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 KDM5BQ9UGL1 1544 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 GLI2P10070 1586 aa2.61□□□□□ -1.99
HMGB1P47-201ENST00000511281 ZCCHC11Q5TAX3 1644 aaKnown RBP2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 MAP3K4Q9Y6R4 1608 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 ZFYVE9O95405 1425 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 ARHGAP35Q9NRY4 1499 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 WDR7Q9Y4E6 1490 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 A8MUN3 132 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 ZNF73O43830 326 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 NPYP01303 97 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 TNNC2P02585 160 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 CPMP14384 443 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 CD200P41217 278 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 XCL1P47992 114 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 GABRA4P48169 554 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 TAS2R30P59541 319 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 POLR2GP62487 172 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 C2orf91Q6ZV80 131 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 ANKRD7Q92527 254 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 ROPN1LQ96C74 230 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 PECRQ9BY49 303 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 CCNB3Q8WWL7 1395 aa2.6□□□□□ -1.99
HMGB1P47-201ENST00000511281 RRBP1Q9P2E9 1410 aaKnown RBP2.59□□□□□ -1.99
HMGB1P47-201ENST00000511281 ABCA8O94911 1581 aa2.59□□□□□ -1.99
HMGB1P47-201ENST00000511281 HECW2Q9P2P5 1572 aa2.59□□□□□ -1.99
HMGB1P47-201ENST00000511281 UBE2L6O14933 153 aa2.59□□□□□ -1.99
HMGB1P47-201ENST00000511281 TRAPPC3O43617 180 aa2.59□□□□□ -1.99
HMGB1P47-201ENST00000511281 IFNA6P05013 189 aa2.59□□□□□ -1.99
HMGB1P47-201ENST00000511281 IGKV4-1P06312 121 aa2.59□□□□□ -1.99
HMGB1P47-201ENST00000511281 CD79AP11912 226 aa2.59□□□□□ -1.99
HMGB1P47-201ENST00000511281 CDK9P50750 372 aaKnown RBP2.59□□□□□ -1.99
HMGB1P47-201ENST00000511281 ZNF767PQ75MW2 155 aa2.59□□□□□ -1.99
HMGB1P47-201ENST00000511281 PRELID1Q9Y255 219 aa2.59□□□□□ -1.99
HMGB1P47-201ENST00000511281 DOCK6Q96HP0 2047 aa2.59□□□□□ -2
HMGB1P47-201ENST00000511281 FLT4P35916 1363 aa2.59□□□□□ -2
HMGB1P47-201ENST00000511281 CD109Q6YHK3 1445 aa2.59□□□□□ -2
HMGB1P47-201ENST00000511281 TEX14Q8IWB6 1497 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 REREQ9P2R6 1566 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 PQLC2LA1A4F0 135 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 FADS1O60427 444 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 HAND1O96004 215 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 FGF6P10767 208 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 HIST1H1TP22492 207 aaPredicted RBP2.58□□□□□ -2
HMGB1P47-201ENST00000511281 BLVRBP30043 206 aaPredicted RBP2.58□□□□□ -2
HMGB1P47-201ENST00000511281 TAS2R20P59543 309 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 PSME3P61289 254 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 OR51D1Q8NGF3 324 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 CNBD2Q96M20 576 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 TLNRD1Q9H1K6 362 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 PSTPIP2Q9H939 334 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 CXorf21Q9HAI6 301 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 CCL26Q9Y258 94 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 MINOS1-NBL1R4GNA1 71 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 FMN1Q68DA7 1419 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 CASKIN1Q8WXD9 1431 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 ATP10BO94823 1461 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 MAP3K1Q13233 1512 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 MAGI3Q5TCQ9 1506 aa2.58□□□□□ -2
HMGB1P47-201ENST00000511281 CTTNBP2Q8WZ74 1663 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 A0A0J9YX75 114 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 SMIM9A6NGZ8 99 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 BHLHE40O14503 412 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 PLA2G10O15496 165 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 ATP5HO75947 161 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 ZNF728P0DKX0 622 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 GZMMP51124 257 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 REEP5Q00765 189 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 GNA12Q03113 381 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 EDDM3AQ14507 147 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 BRD3OSQ6XYD6 125 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 GLT6D1Q7Z4J2 308 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 C20orf196Q8IYI0 205 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 OR5C1Q8NGR4 320 aa2.57□□□□□ -2
HMGB1P47-201ENST00000511281 TUBA4BQ9H853 241 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms