RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 RND2P52198 227 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 RELBQ01201 579 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 FLYWCH2Q96CP2 140 aaKnown RBP14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 PRDM13Q9H4Q3 707 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 IGKV1D-13A0A0B4J2D9 117 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 OR4A8P0C604 315 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 SCGB1C2P0DMR2 95 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 IGKV1-13P0DP09 117 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 UQCRFS1P47985 274 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 NIT1Q86X76 327 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 SCN5AQ14524 2016 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 CACNA1EQ15878 2313 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 CLEC3BP05452 202 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 INO80CQ6PI98 192 aaPredicted RBP14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 DNASE2BQ8WZ79 361 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 OR8B2Q96RD0 313 aa14.62□□□□□ -0.07
HMGXB3-201ENST00000502717 SH2D7A6NKC9 451 aaPredicted RBP14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 PRDX2P32119 198 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 RPL11P62913 178 aaKnown RBP14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 DOLPP1Q86YN1 238 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 STPG3Q8N7X2 389 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 ZNF318Q5VUA4 2279 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 SCO2A0A1W2PP80 73 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 MGST3O14880 152 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 OR2J3O76001 311 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 MOB3BQ86TA1 216 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 SLC25A45Q8N413 288 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 TPRX1Q8N7U7 411 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 HARBI1Q96MB7 349 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 SRXN1Q9BYN0 137 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 TMEM140Q9NV12 185 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 TCF19Q9Y242 345 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 AMMECR1Q9Y4X0 333 aaPredicted RBP14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 PTPRDP23468 1912 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 C1QTNF9BB2RNN3 333 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 MAGEA5P43359 124 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 ZNF324BQ6AW86 544 aaPredicted RBP14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 TCF23Q7RTU1 214 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 A0A1W2PR77 199 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 C1QTNF9P0C862 333 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 KRTCAP3Q53RY4 240 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 OR5P3Q8WZ94 311 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 CHODLQ9H9P2 273 aa14.61□□□□□ -0.07
HMGXB3-201ENST00000502717 NCOR1O75376 2440 aa14.6□□□□□ -0.07
HMGXB3-201ENST00000502717 ABHD12Q8N2K0 398 aa14.6□□□□□ -0.07
HMGXB3-201ENST00000502717 NABP2Q9BQ15 211 aa14.6□□□□□ -0.07
HMGXB3-201ENST00000502717 AGMATQ9BSE5 352 aa14.6□□□□□ -0.07
HMGXB3-201ENST00000502717 VSIRQ9H7M9 311 aa14.6□□□□□ -0.07
HMGXB3-201ENST00000502717 A6NNC1 897 aa14.6□□□□□ -0.07
HMGXB3-201ENST00000502717 ACP1P24666 158 aa14.6□□□□□ -0.07
HMGXB3-201ENST00000502717 CA7P43166 264 aa14.6□□□□□ -0.07
HMGXB3-201ENST00000502717 RNASEH2CQ8TDP1 164 aaKnown RBP14.6□□□□□ -0.07
HMGXB3-201ENST00000502717 IGHV1-45A0A0A0MS14 117 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 IL6RP08887 468 aaPredicted RBP14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 FOXL1Q12952 345 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 GNB4Q9HAV0 340 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 PILRBQ9UKJ0 227 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 INTS1Q8N201 2190 aaKnown RBP14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 K7ESF4 209 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 LIPFP07098 398 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 CELA2AP08217 269 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 NMUP48645 174 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 TNFAIP6P98066 277 aaPredicted RBP14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 ACTL10Q5JWF8 245 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 TMEM116Q8NCL8 245 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 OR2M7Q8NG81 312 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 UBTD1Q9HAC8 227 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 NUDT3O95989 172 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 OTX1P32242 354 aaPredicted RBP14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 LTBRP36941 435 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 SPSB3Q6PJ21 355 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 MESP1Q9BRJ9 268 aa14.59□□□□□ -0.07
HMGXB3-201ENST00000502717 IGLV3-19P01714 112 aa14.58□□□□□ -0.08
HMGXB3-201ENST00000502717 STAG3L2P0CL84 134 aa14.58□□□□□ -0.08
HMGXB3-201ENST00000502717 THSD7BQ9C0I4 1608 aa14.58□□□□□ -0.08
HMGXB3-201ENST00000502717 MRPL32Q9BYC8 188 aaKnown RBP14.58□□□□□ -0.08
HMGXB3-201ENST00000502717 NAPSAO96009 420 aa14.58□□□□□ -0.08
HMGXB3-201ENST00000502717 ZNF441Q8N8Z8 693 aa14.58□□□□□ -0.08
HMGXB3-201ENST00000502717 WDR31Q8NA23 367 aa14.58□□□□□ -0.08
HMGXB3-201ENST00000502717 TMEM208Q9BTX3 173 aa14.58□□□□□ -0.08
HMGXB3-201ENST00000502717 TDRD6O60522 2096 aaKnown RBP14.58□□□□□ -0.08
HMGXB3-201ENST00000502717 OR4C46A6NHA9 309 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 HYPMO75409 117 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 TFPI2P48307 235 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 ATP5IP56385 69 aaPredicted RBP14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 SRSF7Q16629 238 aaKnown RBP eCLIP14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 GRAMD2BQ96HH9 432 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 C1QTNF5Q9BXJ0 243 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 RTN4RL2Q86UN3 420 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 GATAD1Q8WUU5 269 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 MPV17P39210 176 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 TDGF1P3P51864 188 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 C3AR1Q16581 482 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 FBLN7Q53RD9 439 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 NMSQ5H8A3 153 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 FAM90A2PQ658T7 463 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 SSBP3Q9BWW4 388 aaPredicted RBP14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 RFNGQ9Y644 331 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 CACNA1BQ00975 2339 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 PGPA6NDG6 321 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms