RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 IGKV3D-15A0A087WSY6 115 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 FAM157AC9JC47 383 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 LRRC75BQ2VPJ9 315 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 CD177Q8N6Q3 437 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 OR2T10Q8NGZ9 312 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 SNIP1Q8TAD8 396 aaKnown RBP11.22□□□□□ -0.61
GPC1-209ENST00000495100 LINC00470Q9BZP3 86 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 S4R3C0 116 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 A0A087X0M5 115 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 A0A1B0GV90 55 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 A0A1B0GX30 115 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 LYNX1G3V0Z9 82 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 LYNX1P0DP58 116 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 KIR2DL2P43627 348 aaPredicted RBP11.22□□□□□ -0.61
GPC1-209ENST00000495100 HCP5Q6MZN7 132 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 DDA1Q9BW61 102 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 TMEM140Q9NV12 185 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 CCL3L1P16619 93 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 CBLN1P23435 193 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 RPL29P47914 159 aaKnown RBP11.22□□□□□ -0.61
GPC1-209ENST00000495100 SSBP3Q9BWW4 388 aaPredicted RBP11.22□□□□□ -0.61
GPC1-209ENST00000495100 NAT8Q9UHE5 227 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 PXMP4Q9Y6I8 212 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 CCDC168Q8NDH2 2452 aa11.22□□□□□ -0.61
GPC1-209ENST00000495100 SCO2A0A1W2PP80 73 aa11.21□□□□□ -0.61
GPC1-209ENST00000495100 PMCHP20382 165 aa11.21□□□□□ -0.61
GPC1-209ENST00000495100 C10orf55Q5SWW7 151 aa11.21□□□□□ -0.61
GPC1-209ENST00000495100 C10orf91Q5T1B1 145 aa11.21□□□□□ -0.61
GPC1-209ENST00000495100 Q6ZT83 130 aa11.21□□□□□ -0.61
GPC1-209ENST00000495100 DOLPP1Q86YN1 238 aa11.21□□□□□ -0.61
GPC1-209ENST00000495100 OR10X1Q8NGY0 326 aa11.21□□□□□ -0.61
GPC1-209ENST00000495100 MS4A5Q9H3V2 200 aa11.21□□□□□ -0.61
GPC1-209ENST00000495100 DECR2Q9NUI1 292 aa11.21□□□□□ -0.61
GPC1-209ENST00000495100 HCFC1P51610 2035 aa11.21□□□□□ -0.61
GPC1-209ENST00000495100 CA1P00915 261 aaPredicted RBP11.21□□□□□ -0.62
GPC1-209ENST00000495100 ORM2P19652 201 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 COX7A1P24310 79 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 IER3P46695 156 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 SUMO1P63165 101 aaKnown RBP11.21□□□□□ -0.62
GPC1-209ENST00000495100 PEAR1Q5VY43 1037 aaPredicted RBP11.21□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A2PQ658T7 463 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 OR4X1Q8NH49 305 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 IGHV2OR16-5A0A0B4J2B6 119 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 TCTAP57738 103 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 RAB31Q13636 194 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 MOB1BQ7L9L4 216 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 OR10W1Q8NGF6 305 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 EDARADDQ8WWZ3 215 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 UHRF2Q96PU4 802 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 PKIBQ9C010 78 aa11.21□□□□□ -0.62
GPC1-209ENST00000495100 METTL1Q9UBP6 276 aaKnown RBP11.21□□□□□ -0.62
GPC1-209ENST00000495100 CTXND1A0A1B0GTU2 59 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 K7EM74 188 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 FOXH1O75593 365 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 TMEM11P17152 192 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 CHRNB4P30926 498 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 CDX1P47902 265 aaPredicted RBP11.2□□□□□ -0.62
GPC1-209ENST00000495100 CAMPP49913 170 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 KRTDAPP60985 99 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 RPL23P62829 140 aaKnown RBP11.2□□□□□ -0.62
GPC1-209ENST00000495100 KCNIP4Q6PIL6 250 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 TNRC6AQ8NDV7 1962 aaKnown RBP11.2□□□□□ -0.62
GPC1-209ENST00000495100 TRGV10A0A0A0MS01 117 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 CD81P60033 236 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 UNQ6494/PRO21346Q6UXR6 183 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 TAAR6Q96RI8 345 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 SDF2L1Q9HCN8 221 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 ZNF292O60281 2723 aa11.2□□□□□ -0.62
GPC1-209ENST00000495100 ACSF3Q4G176 576 aaPredicted RBP11.19□□□□□ -0.62
GPC1-209ENST00000495100 ASCL2Q99929 193 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 COMMD5Q9GZQ3 224 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 SONP18583 2426 aaKnown RBP11.19□□□□□ -0.62
GPC1-209ENST00000495100 C2CD3Q4AC94 2353 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 EXPH5Q8NEV8 1989 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 SEC14L6B5MCN3 397 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 UBE2CO00762 179 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 CGAP01215 116 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 IGFBP2P18065 325 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 INO80CQ6PI98 192 aaPredicted RBP11.19□□□□□ -0.62
GPC1-209ENST00000495100 TOMM20LQ6UXN7 152 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 SORL1Q92673 2214 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 IGHV1-18A0A0C4DH31 117 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A10PA6NDY2 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A18PA6NE21 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A16PA6NEW6 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A20PA6NIJ5 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A8PA6NJQ4 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A7PA6NKC0 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A22PA8MWA6 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A12PA8MX19 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A5PA8MXJ8 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A23PA8MXZ1 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A15PP0C7V4 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A13PP0C7W8 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A14PP0C7W9 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 FAM90A24PP0C7X0 464 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 CD24P25063 80 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 C19orf35Q6ZS72 473 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 SAXO1Q8IYX7 474 aa11.19□□□□□ -0.62
GPC1-209ENST00000495100 RYDENQ9NUL5 291 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms