RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 GGNQ86UU5 652 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 UBALD2Q8IYN6 164 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 SFXN3Q9BWM7 321 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 PILRBQ9UKJ0 227 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 PPIAL4EA0A075B759 164 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 TRBV6-6A0A0A6YYG2 114 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 PPIAL4CA0A0B4J2A2 164 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 A0A1B0GV72 72 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 PPIAL4DF5H284 164 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 TNFSF15O95150 251 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 PPIAL4FP0DN26 164 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 LGALS4P56470 323 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 CCL7P80098 99 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 NRN1LQ496H8 165 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 PCSK4Q6UW60 755 aa9.7□□□□□ -0.86
SEC61A1-205ENST00000483956 LY6G6EA0A0G2JKS1 128 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 SYNGR2O43760 224 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 SRIP30626 198 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 SRD5A2P31213 254 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 CA7P43166 264 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 SELENOVP59797 346 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 SLC38A11Q08AI6 406 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 PSG7Q13046 419 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 OR10J3Q5JRS4 329 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 BATF2Q8N1L9 274 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 OCC1Q8TAD7 63 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 LSM10Q969L4 123 aaKnown RBP9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 TMEM204Q9BSN7 226 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 U3KQA8 63 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 GAGE10A6NGK3 116 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 REG1AP05451 166 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 AZU1P20160 251 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 GPR6P46095 362 aaPredicted RBP9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 SMAGPQ0VAQ4 97 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 LINC00596Q86U02 117 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 FGF23Q9GZV9 251 aaPredicted RBP9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 GTSF1LQ9H1H1 148 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 PLSCR4Q9NRQ2 329 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 TNRC6AQ8NDV7 1962 aaKnown RBP9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 LRP5LA4QPB2 252 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 SIRPB1O00241 398 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 PDE6DO43924 150 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 RHOBP62745 196 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 HLA-BQ31612 363 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 EBLN2Q6P2I7 272 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 DUSP23Q9BVJ7 150 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 PEF1Q9UBV8 284 aaKnown RBP9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 CACNG5Q9UF02 275 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 OR2W1Q9Y3N9 320 aa9.69□□□□□ -0.86
SEC61A1-205ENST00000483956 SERPINE2P07093 398 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 CEACAM21Q3KPI0 293 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 SPATA12Q7Z6I5 190 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 OR8I2Q8N0Y5 310 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 CHRDL1Q9BU40 450 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 QTRT1Q9BXR0 403 aaKnown RBP9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 DEGS1O15121 323 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 SLC35B1P78383 322 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 HTD2P86397 168 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 STXBP6Q8NFX7 210 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 OR10W1Q8NGF6 305 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 HS3ST6Q96QI5 342 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 ATP6V0BQ99437 205 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 GNB1LQ9BYB4 327 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 FNDC4Q9H6D8 234 aaPredicted RBP9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 GP6Q9HCN6 339 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 MTCH1Q9NZJ7 389 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 CRIM1Q9NZV1 1036 aa9.68□□□□□ -0.86
SEC61A1-205ENST00000483956 NPIPB11E5RHQ5 1161 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 HAND1O96004 215 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 MT-CO2P00403 227 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 SSTR5P35346 364 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 CEACAM3P40198 252 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 CACNA1EQ15878 2313 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 ZNF841Q6ZN19 808 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 CNTRLQ7Z7A1 2325 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 RPS19BP1Q86WX3 136 aaKnown RBP9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 MKXQ8IYA7 352 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 OR51H1Q8NH63 302 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 TIMM9Q9Y5J7 89 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 TRAV9-1A0A075B6T8 112 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 TRAPPC2LH3BP13 241 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 J3QR06 171 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 K7EN84 100 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 CD5LO43866 347 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 CXCL13O43927 109 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 PSG2P11465 335 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 GPM6AP51674 278 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 UFSP1Q6NVU6 142 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 MMD2Q8IY49 270 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 CLDN23Q96B33 292 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 NPVFQ9HCQ7 196 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 OCIAD1Q9NX40 245 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 IL36RNQ9UBH0 155 aa9.67□□□□□ -0.86
SEC61A1-205ENST00000483956 TRAV26-1A0A087WT03 109 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 IGFBP4P22692 258 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 NPY1RP25929 384 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 RAB9AP51151 201 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 IL11RAQ14626 422 aa9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 YRDCQ86U90 279 aaKnown RBP9.66□□□□□ -0.86
SEC61A1-205ENST00000483956 TMEM45BQ96B21 275 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms