RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 NMNAT3Q96T66 252 aa2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 CENPHQ9H3R5 247 aa2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 TRABDQ9H4I3 376 aa2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 SMDT1Q9H4I9 107 aa2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 RSL24D1Q9UHA3 163 aaKnown RBP2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 KLK5Q9Y337 293 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 UTP11Q9Y3A2 253 aaKnown RBP2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 PIK3C2GO75747 1445 aa2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 CEP170Q5SW79 1584 aa2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 SCN4AP35499 1836 aa2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 KIF26AQ9ULI4 1882 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P26-201ENST00000452520 OTOFQ9HC10 1997 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 TRBV20OR9-2A0A075B6H5 130 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 IGHV3-73A0A0B4J1V6 119 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 OR5K4A6NMS3 321 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 OR11H12B2RN74 326 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 I3L521 148 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 IFNA1P01562 189 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 SERPINE1P05121 402 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 ZNF705DP0CH99 300 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 TAS2R41P59536 307 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 HTR4Q13639 388 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 CST6Q15828 149 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 AKAP14Q86UN6 197 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 EIF4E3Q8N5X7 224 aaKnown RBP2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 GDPD1Q8N9F7 314 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 Q8NAQ8 132 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 OR11H6Q8NGC7 330 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 OR10P1Q8NGE3 313 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 OR11H2Q8NH07 326 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 ZNF2Q9BSG1 426 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 COMMD5Q9GZQ3 224 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 WDR61Q9GZS3 305 aaKnown RBP2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 R4GN34 69 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 DSCAMO60469 2012 aa2.8□□□□□ -1.96
HMGB1P26-201ENST00000452520 IGLV2-18A0A075B6J9 118 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 A0A1B0GU33 70 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 TMEM269A0A1B0GVZ9 245 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 A0A1B0GW54 56 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 C17orf51A8MQB3 221 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 C17orf98A8MV24 154 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 NDUFB2O95178 105 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 SOD1P00441 154 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 IGHV1-69P01742 117 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 SRP19P09132 144 aaKnown RBP2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 ZNF22P17026 224 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 CRHBPP24387 322 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 GABRA2P47869 451 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 RAB13P51153 203 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 HSPE1P61604 102 aaKnown RBP2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 C12orf74Q32Q52 190 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 WDR59Q6PJI9 974 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 SMARCD3Q6STE5 483 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 Q6ZS49 121 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 SMIM20Q8N5G0 67 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 TBC1D19Q8N5T2 526 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 C1orf64Q8NEQ6 169 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 OR13C8Q8NGS7 320 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 DEDD2Q8WXF8 326 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 PCBD2Q9H0N5 130 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 ABCG5Q9H222 651 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 C11orf68Q9H3H3 251 aaKnown RBP2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 BOLA2Q9H3K6 86 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 FBXL12Q9NXK8 326 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 MCTS1Q9ULC4 181 aaKnown RBP2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 UFC1Q9Y3C8 167 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 ATG2BQ96BY7 2078 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 ATAD5Q96QE3 1844 aa2.79□□□□□ -1.96
HMGB1P26-201ENST00000452520 NUP155O75694 1391 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 ABCC12Q96J65 1359 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 PTPRJQ12913 1337 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 hCG_1818297A0A087WSY0 165 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 A8MT66 165 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 LPAR6P43657 344 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 RPS11P62280 158 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 ZNF141Q15928 474 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 TMPPEQ6ZT21 453 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 CNEP1R1Q8N9A8 125 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 GNPDA2Q8TDQ7 276 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 ACOT12Q8WYK0 555 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 OR8B2Q96RD0 313 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 KLF6Q99612 283 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 MND1Q9BWT6 205 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 TMEM222Q9H0R3 208 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 DUSP21Q9H596 190 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 ASF1BQ9NVP2 202 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 TMEM56-RWDD3S4R434 201 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 ADAMTSL1Q8N6G6 1762 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 RB1CC1Q8TDY2 1594 aa2.78□□□□□ -1.96
HMGB1P26-201ENST00000452520 ROBO3Q96MS0 1386 aa2.77□□□□□ -1.97
HMGB1P26-201ENST00000452520 MDFIC2A0A1B0GVS7 189 aa2.77□□□□□ -1.97
HMGB1P26-201ENST00000452520 GRIFINA4D1Z8 144 aa2.77□□□□□ -1.97
HMGB1P26-201ENST00000452520 H3BQV1 296 aa2.77□□□□□ -1.97
HMGB1P26-201ENST00000452520 PIRO00625 290 aa2.77□□□□□ -1.97
HMGB1P26-201ENST00000452520 ATG12O94817 140 aa2.77□□□□□ -1.97
HMGB1P26-201ENST00000452520 ZNF682O95780 498 aa2.77□□□□□ -1.97
HMGB1P26-201ENST00000452520 S100A7P31151 101 aa2.77□□□□□ -1.97
HMGB1P26-201ENST00000452520 RPL27AP46776 148 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms