RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 NRN1Q9NPD7 142 aa16.79■□□□□ 0.28
SHANK1-203ENST00000391813 HSPB7Q9UBY9 170 aa16.79■□□□□ 0.28
SHANK1-203ENST00000391813 MRPL52Q86TS9 123 aaKnown RBP16.79■□□□□ 0.28
SHANK1-203ENST00000391813 DRAM1Q8N682 238 aa16.79■□□□□ 0.28
SHANK1-203ENST00000391813 TCF19Q9Y242 345 aa16.79■□□□□ 0.28
SHANK1-203ENST00000391813 TMSB15BA0A087X1C1 80 aa16.79■□□□□ 0.28
SHANK1-203ENST00000391813 PGLYRP4Q96LB8 373 aa16.79■□□□□ 0.28
SHANK1-203ENST00000391813 NABP2Q9BQ15 211 aa16.79■□□□□ 0.28
SHANK1-203ENST00000391813 HIST1H4GQ99525 98 aa16.78■□□□□ 0.28
SHANK1-203ENST00000391813 M0R3E3 92 aa16.78■□□□□ 0.28
SHANK1-203ENST00000391813 SRSF4Q08170 494 aaKnown RBP16.78■□□□□ 0.28
SHANK1-203ENST00000391813 HS3ST3B1Q9Y662 390 aa16.78■□□□□ 0.28
SHANK1-203ENST00000391813 TNFSF13O75888 250 aa16.78■□□□□ 0.28
SHANK1-203ENST00000391813 COX6CP09669 75 aa16.78■□□□□ 0.28
SHANK1-203ENST00000391813 TCF24Q7RTU0 167 aa16.78■□□□□ 0.28
SHANK1-203ENST00000391813 MOGAT3Q86VF5 341 aa16.78■□□□□ 0.28
SHANK1-203ENST00000391813 IMMP2LQ96T52 175 aa16.78■□□□□ 0.28
SHANK1-203ENST00000391813 TMPRSS2O15393 492 aa16.78■□□□□ 0.28
SHANK1-203ENST00000391813 NDUFS6O75380 124 aaKnown RBP16.78■□□□□ 0.28
SHANK1-203ENST00000391813 ARF6P62330 175 aa16.78■□□□□ 0.28
SHANK1-203ENST00000391813 GTF3AQ92664 365 aaKnown RBP16.78■□□□□ 0.28
SHANK1-203ENST00000391813 MPV17P39210 176 aa16.77■□□□□ 0.28
SHANK1-203ENST00000391813 C1orf194Q5T5A4 169 aa16.77■□□□□ 0.28
SHANK1-203ENST00000391813 MDP1Q86V88 176 aa16.77■□□□□ 0.28
SHANK1-203ENST00000391813 C18orf12Q96KH6 178 aa16.77■□□□□ 0.28
SHANK1-203ENST00000391813 RAB1BQ9H0U4 201 aa16.77■□□□□ 0.28
SHANK1-203ENST00000391813 MAP1LC3AQ9H492 121 aa16.77■□□□□ 0.28
SHANK1-203ENST00000391813 SOX21Q9Y651 276 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-203ENST00000391813 SPTBN2O15020 2390 aa16.77■□□□□ 0.28
SHANK1-203ENST00000391813 RPS20P60866 119 aaKnown RBP16.77■□□□□ 0.28
SHANK1-203ENST00000391813 P2RY6Q15077 328 aa16.77■□□□□ 0.27
SHANK1-203ENST00000391813 FBLN7Q53RD9 439 aa16.77■□□□□ 0.27
SHANK1-203ENST00000391813 STPG3Q8N7X2 389 aa16.77■□□□□ 0.27
SHANK1-203ENST00000391813 LRTM2Q8N967 370 aa16.77■□□□□ 0.27
SHANK1-203ENST00000391813 CCL21O00585 134 aa16.77■□□□□ 0.27
SHANK1-203ENST00000391813 BHLHA15Q7RTS1 189 aaPredicted RBP16.77■□□□□ 0.27
SHANK1-203ENST00000391813 CCL17Q92583 94 aa16.77■□□□□ 0.27
SHANK1-203ENST00000391813 TTTY12Q9BZ98 90 aa16.77■□□□□ 0.27
SHANK1-203ENST00000391813 OR51G1Q8NGK1 321 aa16.76■□□□□ 0.27
SHANK1-203ENST00000391813 MBD3L1Q8WWY6 194 aa16.76■□□□□ 0.27
SHANK1-203ENST00000391813 AHRRA9YTQ3 701 aa16.76■□□□□ 0.27
SHANK1-203ENST00000391813 TTC32Q5I0X7 151 aa16.76■□□□□ 0.27
SHANK1-203ENST00000391813 LOC101059948A0A1B0GTJ6 334 aa16.76■□□□□ 0.27
SHANK1-203ENST00000391813 IGKV3-11P04433 115 aa16.76■□□□□ 0.27
SHANK1-203ENST00000391813 SNRPCP09234 159 aaKnown RBP16.76■□□□□ 0.27
SHANK1-203ENST00000391813 CXCL1P09341 107 aa16.76■□□□□ 0.27
SHANK1-203ENST00000391813 MUC15Q8N387 334 aa16.76■□□□□ 0.27
SHANK1-203ENST00000391813 TRAV1-1A0A0B4J248 108 aa16.75■□□□□ 0.27
SHANK1-203ENST00000391813 RPL8P62917 257 aaKnown RBP16.75■□□□□ 0.27
SHANK1-203ENST00000391813 SPANXN1Q5VSR9 72 aa16.75■□□□□ 0.27
SHANK1-203ENST00000391813 FAM89BQ8N5H3 189 aa16.75■□□□□ 0.27
SHANK1-203ENST00000391813 SLC17A3O00476 420 aa16.75■□□□□ 0.27
SHANK1-203ENST00000391813 SVILO95425 2214 aa16.75■□□□□ 0.27
SHANK1-203ENST00000391813 CHODLQ9H9P2 273 aa16.75■□□□□ 0.27
SHANK1-203ENST00000391813 C19orf67A6NJJ6 358 aa16.75■□□□□ 0.27
SHANK1-203ENST00000391813 ID3Q02535 119 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 INSIG2Q9Y5U4 225 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 RALGAPA2Q2PPJ7 1873 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 C16orf97H3BN30 126 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 JPT1Q9UK76 154 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 TRAV9-2A0A087WT02 112 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 LYPD3O95274 346 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 RPL27AP46776 148 aaKnown RBP16.74■□□□□ 0.27
SHANK1-203ENST00000391813 C1orf185Q5T7R7 199 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 GFI1BQ5VTD9 330 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 MYOFQ9NZM1 2061 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 MC5RP33032 325 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 DGAT2L7PQ6IED9 249 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 OR1N2Q8NGR9 330 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 ZNF502Q8TBZ5 544 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 ONECUT1Q9UBC0 465 aa16.74■□□□□ 0.27
SHANK1-203ENST00000391813 COX7A1P24310 79 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 SSTR5P35346 364 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 PTGDSP41222 190 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 CCL20P78556 96 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 TPRX1Q8N7U7 411 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 SSBP3Q9BWW4 388 aaPredicted RBP16.73■□□□□ 0.27
SHANK1-203ENST00000391813 TNFRSF19Q9NS68 423 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 GOSR1O95249 250 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 ASCL5Q7RTU5 278 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 NEUROG1Q92886 237 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 RAB1CQ92928 201 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 MST1P26927 711 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 ZNF841Q6ZN19 808 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 ZNF414Q96IQ9 312 aa16.73■□□□□ 0.27
SHANK1-203ENST00000391813 ODAMA1E959 279 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 IL6RP08887 468 aaPredicted RBP16.72■□□□□ 0.27
SHANK1-203ENST00000391813 GNB2P62879 340 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 ZNF146Q15072 292 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 ABHD12Q8N2K0 398 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 SRSF12Q8WXF0 261 aaKnown RBP16.72■□□□□ 0.27
SHANK1-203ENST00000391813 SPCS1Q9Y6A9 102 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 LHFPL1Q86WI0 220 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 WDR31Q8NA23 367 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 C1RLQ9NZP8 487 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 ATP5G3P48201 142 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 TBR1Q16650 682 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 SAMD13Q5VXD3 122 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 ABCA7Q8IZY2 2146 aa16.72■□□□□ 0.27
SHANK1-203ENST00000391813 PNKDQ8N490 385 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms