RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 CDKN1BP46527 198 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 LINC00310P59036 64 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 AESQ08117 197 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 MRPL49Q13405 166 aaKnown RBP13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 ZNF645Q8N7E2 425 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 ZDHHC16Q969W1 377 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 C5orf30Q96GV9 206 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 NBEAQ8NFP9 2946 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 TRGV5A0A0B4J1U4 118 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 ODAMA1E959 279 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 C12orf77C9JDV5 145 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 LYZL6O75951 148 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 TFF1P04155 84 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 CD82P27701 267 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 TFPI2P48307 235 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 GCSAMLQ5JQS6 135 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 ATP1A1-AS1Q5TC04 95 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 VHLLQ6RSH7 139 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 CHTOPQ9Y3Y2 248 aaKnown RBP13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 RAC2P15153 192 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 S100A7P31151 101 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 ZNF90Q03938 601 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 BAGE3Q86Y29 109 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 BAGE2Q86Y30 109 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 SAMD10Q9BYL1 202 aa13.84□□□□□ -0.19
PCDHA1-201ENST00000378133 A0A1W2PPV4 95 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 RBMXL2O75526 392 aaKnown RBP13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 LINC00205P59089 165 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 ZNF766Q5HY98 468 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 COL5A1-AS1Q5SY13 56 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 GCNT2Q8N0V5 402 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 OR10G8Q8NGN5 311 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 MRPL18Q9H0U6 180 aaKnown RBP13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 OBP2BQ9NPH6 170 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 TRBV20OR9-2A0A075B6H5 130 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 C17orf98A8MV24 154 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 S1PR2O95136 353 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 ZNF883P0CG24 379 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 ESDP10768 282 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 CD46P15529 392 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 IGHV1-2P23083 117 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 MPV17P39210 176 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 VWC2Q2TAL6 325 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 SPINK9Q5DT21 86 aa13.83□□□□□ -0.2
PCDHA1-201ENST00000378133 TMEM30CPA0ZSE6 113 aa13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 HBZP02008 142 aa13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 THBS3P49746 956 aa13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 BRWD1-AS2P59051 145 aa13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 DSPP15924 2871 aaKnown RBP13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 TIMP3P35625 211 aa13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 EDDM3BP56851 147 aa13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 TMPRSS7Q7RTY8 843 aa13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 OCC1Q8TAD7 63 aa13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 CIB3Q96Q77 187 aaPredicted RBP13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 TMEM204Q9BSN7 226 aa13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 ZFP30Q9Y2G7 519 aa13.82□□□□□ -0.2
PCDHA1-201ENST00000378133 IQCF6A8MYZ5 107 aa13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 RAB7AP51149 207 aa13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 TPRX1Q8N7U7 411 aa13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 KLF14Q8TD94 323 aaPredicted RBP13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 MRGPRDQ8TDS7 321 aa13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 J3QW42 95 aa13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 CDX4O14627 284 aaPredicted RBP13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 P0C879 139 aa13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 RNF151Q2KHN1 245 aa13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 Q6ZR03 302 aa13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 C11orf42Q8N5U0 333 aa13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 ZBTB34Q8NCN2 500 aa13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 FER1L6-AS2Q96M78 137 aa13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 QTRT1Q9BXR0 403 aaKnown RBP13.81□□□□□ -0.2
PCDHA1-201ENST00000378133 GABRA2P47869 451 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 ARG2P78540 354 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 TGFBR3Q03167 851 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 MSL2Q9HCI7 577 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 IGHV3-43A0A0B4J1X8 118 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 OOEPA6NGQ2 149 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 F2Z2F3 143 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 FCN1O00602 326 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 TNFSF15O95150 251 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 IGHV3-43DP0DP04 118 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 EIF4EBP1Q13541 118 aaPredicted RBP13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 TMEM249Q2WGJ8 235 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 C11orf53Q8IXP5 236 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 Q8N7P7 452 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 RFESDQ8TAC1 157 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 RAB1CQ92928 201 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 NINJ1Q92982 152 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 FAM103A1Q9BTL3 118 aaKnown RBP13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 HES4Q9HCC6 221 aa13.8□□□□□ -0.2
PCDHA1-201ENST00000378133 SCO2A0A1W2PP80 73 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 SLC17A3O00476 420 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 CD59P13987 128 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 CHRNB4P30926 498 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 COMPP49747 757 aaPredicted RBP13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 KRTDAPP60985 99 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 CATR1Q13166 79 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 MMDQ15546 238 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 GABRA6Q16445 453 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 DHRS13Q6UX07 377 aa13.79□□□□□ -0.2
PCDHA1-201ENST00000378133 SIGLECL1Q8N7X8 197 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms