RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 RAB7AP51149 207 aa12.46□□□□□ -0.41
TNFSF13-201ENST00000338784 C3orf36Q3SXR2 165 aa12.46□□□□□ -0.41
TNFSF13-201ENST00000338784 IGFL3Q6UXB1 125 aa12.46□□□□□ -0.41
TNFSF13-201ENST00000338784 ITLN1Q8WWA0 313 aa12.46□□□□□ -0.41
TNFSF13-201ENST00000338784 NEIL1Q96FI4 390 aaPredicted RBP12.46□□□□□ -0.41
TNFSF13-201ENST00000338784 RAB9BQ9NP90 201 aa12.46□□□□□ -0.41
TNFSF13-201ENST00000338784 CACNA1DQ01668 2161 aa12.46□□□□□ -0.42
TNFSF13-201ENST00000338784 LINC00587B1AMM8 73 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 DEFA4P12838 97 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 VDAC2P45880 294 aaPredicted RBP12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 RELBQ01201 579 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 OR10A7Q8NGE5 316 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 NCOR1P1Q9H4R4 102 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 TMEM140Q9NV12 185 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 GAB2Q9UQC2 676 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 FAM215AQ9Y5M1 114 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 IGLV3-9A0A075B6K5 115 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 C11orf94C9JXX5 98 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 ITGB1BP1O14713 200 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 PFN1P07737 140 aaKnown RBP12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 CGB3P0DN86 165 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 CGB7P0DN87 165 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 OR4S2Q8NH73 311 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 DDB2Q92466 427 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 RAB1CQ92928 201 aa12.45□□□□□ -0.42
TNFSF13-201ENST00000338784 PRR14LQ5THK1 2151 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 ATRXP46100 2492 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 A0A1W2PPV4 95 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 H7BYZ3 331 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 RRHO14718 337 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 PHOX2AO14813 284 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 SLC31A2O15432 143 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 GATA4P43694 442 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 TMPRSS3P57727 454 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 C17orf58Q2M2W7 97 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 TMEM249Q2WGJ8 235 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 C4orf17Q53FE4 359 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 GCSAMLQ5JQS6 135 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 TREML4Q6UXN2 200 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 HIST3H2BBQ8N257 126 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 RPRMLQ8N4K4 120 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 OR5B12Q96R08 314 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 SRD5A3Q9H8P0 318 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 ZFYVE26Q68DK2 2539 aa12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 CHD3Q12873 2000 aaKnown RBP12.44□□□□□ -0.42
TNFSF13-201ENST00000338784 TRAV3A0A0B4J244 114 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 TRAV38-1A0A0B4J264 116 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 VENTXO95231 258 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 SOD3P08294 240 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 OPRK1P41145 380 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 PYY3Q5JQD4 70 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 FAM201AQ5SY85 155 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 C1orf185Q5T7R7 199 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 C1orf229Q6ZS94 237 aaPredicted RBP12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 OR51G1Q8NGK1 321 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 FAM222BQ8WU58 562 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 ANAPC16Q96DE5 110 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 PYGO2Q9BRQ0 406 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 GFOD1Q9NXC2 390 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 ZZEF1O43149 2961 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 KBTBD11-OT1A0A1B0GTJ5 212 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 PRSS46E5RG02 174 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 PDE6DO43924 150 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 GYPAP02724 150 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 SELLP14151 372 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 GALR1P47211 349 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 SELENOVP59797 346 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 CT45A1Q5HYN5 189 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 GFI1BQ5VTD9 330 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 ABHD12Q8N2K0 398 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 NECAP1Q8NC96 275 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 CT45A3Q8NHU0 189 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 LEAP2Q969E1 77 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 GPR61Q9BZJ8 451 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 RNF7Q9UBF6 113 aa12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 DIDO1Q9BTC0 2240 aaKnown RBP12.43□□□□□ -0.42
TNFSF13-201ENST00000338784 TRGV10A0A0A0MS01 117 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 TRGV8A0A0C4DH27 118 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 IGHV2-70P01814 119 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 TIMP3P35625 211 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 UTF1Q5T230 341 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 Q6ZS92 163 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 TGIF2LYQ8IUE0 185 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 OR10D4PQ8NGN7 298 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 SDSLQ96GA7 329 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 MS4A5Q9H3V2 200 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 GCM1Q9NP62 436 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 TCF19Q9Y242 345 aa12.42□□□□□ -0.42
TNFSF13-201ENST00000338784 SAA2-SAA4A0A096LPE2 208 aa12.41□□□□□ -0.42
TNFSF13-201ENST00000338784 C15orf61A6NNL5 157 aa12.41□□□□□ -0.42
TNFSF13-201ENST00000338784 HRASP01112 189 aa12.41□□□□□ -0.42
TNFSF13-201ENST00000338784 SAA2P0DJI9 122 aaPredicted RBP12.41□□□□□ -0.42
TNFSF13-201ENST00000338784 THBS3P49746 956 aa12.41□□□□□ -0.42
TNFSF13-201ENST00000338784 RTP5Q14D33 572 aa12.41□□□□□ -0.42
TNFSF13-201ENST00000338784 PDZD11Q5EBL8 140 aa12.41□□□□□ -0.42
TNFSF13-201ENST00000338784 TMEM170AQ8WVE7 144 aa12.41□□□□□ -0.42
TNFSF13-201ENST00000338784 RHOVQ96L33 236 aa12.41□□□□□ -0.42
TNFSF13-201ENST00000338784 MGST2Q99735 147 aa12.41□□□□□ -0.42
TNFSF13-201ENST00000338784 SFXN3Q9BWM7 321 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms