RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CER1O95813 267 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 ARL14EPLP0DKL9 152 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 RPL30P62888 115 aaKnown RBP11.51□□□□□ -0.57
SYNE3-201ENST00000334258 HTD2P86397 168 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 WFDC12Q8WWY7 111 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 NINJ1Q92982 152 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 QTRT1Q9BXR0 403 aaKnown RBP11.51□□□□□ -0.57
SYNE3-201ENST00000334258 WIPI2Q9Y4P8 454 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 NBASA2RRP1 2371 aa11.51□□□□□ -0.57
SYNE3-201ENST00000334258 TRBV20OR9-2A0A075B6H5 130 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 F2Z2F3 143 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 CD1BP29016 333 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 SUMO1P63165 101 aaKnown RBP11.5□□□□□ -0.57
SYNE3-201ENST00000334258 VASH2Q86V25 355 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 CSTL1Q9H114 145 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 OR5B21A6NL26 309 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 C17orf98A8MV24 154 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 DIRC3C9JPN6 131 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 TIMP3P35625 211 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 TP53TG3Q9ULZ0 132 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 PMCHP20382 165 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 AMTP48728 403 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 KLF3P57682 345 aaPredicted RBP11.5□□□□□ -0.57
SYNE3-201ENST00000334258 YPEL3P61236 119 aaPredicted RBP11.5□□□□□ -0.57
SYNE3-201ENST00000334258 LHFPL4Q7Z7J7 247 aa11.5□□□□□ -0.57
SYNE3-201ENST00000334258 LOC105371242A0A075B767 164 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 ZNF503-AS2A6NEH8 195 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 LINC00205P59089 165 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 TUSC5Q8IXB3 177 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 OR52L2PQ8NGH6 319 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 GALMQ96C23 342 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 LOC102723996A0A087X1L8 192 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 A0A1W2PN81 502 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 PMS2P5A8MQ11 134 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 NPIPB11E5RHQ5 1161 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 YPEL1O60688 119 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 LHX2P50458 406 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 KIAA1644Q3SXP7 199 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 MRPL52Q86TS9 123 aaKnown RBP11.49□□□□□ -0.57
SYNE3-201ENST00000334258 YPEL2Q96QA6 119 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 MPC1Q9Y5U8 109 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 ACACAQ13085 2346 aa11.49□□□□□ -0.57
SYNE3-201ENST00000334258 CEBPDP49716 269 aaPredicted RBP11.48□□□□□ -0.57
SYNE3-201ENST00000334258 HLA-DRB5Q30154 266 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 Q6P435 159 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 Q6ZN92 141 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 ZNF497Q6ZNH5 498 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 ZNF645Q8N7E2 425 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 NAT8BQ9UHF3 227 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 J3QT63 122 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 GOSR1O95249 250 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 FRMD6-AS1P0C7T7 363 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 SLC35B1P78383 322 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 SPATA45Q537H7 98 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 KRTCAP3Q53RY4 240 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 ERASQ7Z444 233 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 STARD4Q96DR4 205 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 SLC35E1Q96K37 410 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 WDR54Q9H977 334 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 SPTBN4Q9H254 2564 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 CDIPTO14735 213 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 GRPP07492 148 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 LDLRAD2Q5SZI1 272 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 MIC13Q5XKP0 118 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 SSMEM1Q8WWF3 244 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 HEYLQ9NQ87 328 aaPredicted RBP11.48□□□□□ -0.57
SYNE3-201ENST00000334258 DEPPQ9NTK1 212 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 IL36BQ9NZH7 164 aa11.48□□□□□ -0.57
SYNE3-201ENST00000334258 SMG1Q96Q15 3661 aaKnown RBP11.48□□□□□ -0.57
SYNE3-201ENST00000334258 SH2D1BO14796 132 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 KLF7O75840 302 aaPredicted RBP11.47□□□□□ -0.57
SYNE3-201ENST00000334258 LINC00310P59036 64 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 RPL31P62899 125 aaKnown RBP11.47□□□□□ -0.57
SYNE3-201ENST00000334258 LTC4SQ16873 150 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 OR8I2Q8N0Y5 310 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 OR4C5Q8NGB2 326 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 OR4B1Q8NGF8 309 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 LRFN3Q9BTN0 628 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 ZNF430Q9H8G1 570 aaPredicted RBP11.47□□□□□ -0.57
SYNE3-201ENST00000334258 FBXL7Q9UJT9 491 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 DEFB108AA8MXU0 73 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 HNRNPA3P51991 378 aaKnown RBP11.47□□□□□ -0.57
SYNE3-201ENST00000334258 RFESDQ8TAC1 157 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 TNFRSF14Q92956 283 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 SH2D2AQ9NP31 389 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 LOXL2Q9Y4K0 774 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 TBL2Q9Y4P3 447 aaKnown RBP11.47□□□□□ -0.57
SYNE3-201ENST00000334258 TPRP12270 2363 aaKnown RBP11.47□□□□□ -0.57
SYNE3-201ENST00000334258 IGHV3-43A0A0B4J1X8 118 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 K7EP13 123 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 NEURL1O76050 574 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 NDUFB8O95169 186 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 IGHV3-43DP0DP04 118 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 RIPPLY3P57055 190 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 PLPPR2Q96GM1 343 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 POM121L2Q96KW2 1035 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 UHRF2Q96PU4 802 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 FAM234AQ9H0X4 552 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 WDR83OSQ9Y284 106 aa11.47□□□□□ -0.57
SYNE3-201ENST00000334258 MED12LQ86YW9 2145 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms