RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 HPRT1P00492 218 aa16.58■□□□□ 0.24
RIPPLY3-201ENST00000329553 S100A6P06703 90 aa16.58■□□□□ 0.24
RIPPLY3-201ENST00000329553 RPL23AP62750 156 aaKnown RBP16.58■□□□□ 0.24
RIPPLY3-201ENST00000329553 CTAG1AP78358 180 aa16.58■□□□□ 0.24
RIPPLY3-201ENST00000329553 ICAM4Q14773 271 aa16.58■□□□□ 0.24
RIPPLY3-201ENST00000329553 ZNF506Q5JVG8 444 aa16.58■□□□□ 0.24
RIPPLY3-201ENST00000329553 C11orf42Q8N5U0 333 aa16.58■□□□□ 0.24
RIPPLY3-201ENST00000329553 RBMXL1Q96E39 390 aaKnown RBP16.58■□□□□ 0.24
RIPPLY3-201ENST00000329553 WSB1Q9Y6I7 421 aa16.58■□□□□ 0.24
RIPPLY3-201ENST00000329553 TRBV23-1A0A0A0MS06 115 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 SYNGR2O43760 224 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 SCAF4O95104 1147 aaKnown RBP16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 HSPB1P04792 205 aaKnown RBP16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 RNF224P0DH78 156 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 TLE4Q04727 773 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 H2BFWTQ7Z2G1 175 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 RAB1CQ92928 201 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 R3HDM4Q96D70 268 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 METTL1Q9UBP6 276 aaKnown RBP16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 MARCH11A6NNE9 402 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 RBFOX2O43251 390 aaKnown RBP eCLIP16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 HAGHQ16775 308 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 ZNF383Q8NA42 475 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 CLDND2Q8NHS1 167 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 TIMD4Q96H15 378 aa16.57■□□□□ 0.24
RIPPLY3-201ENST00000329553 H3BQ15 152 aa16.56■□□□□ 0.24
RIPPLY3-201ENST00000329553 NDUFS7O75251 213 aa16.56■□□□□ 0.24
RIPPLY3-201ENST00000329553 IGHV2-5P01817 119 aa16.56■□□□□ 0.24
RIPPLY3-201ENST00000329553 HBE1P02100 147 aa16.56■□□□□ 0.24
RIPPLY3-201ENST00000329553 S100A12P80511 92 aa16.56■□□□□ 0.24
RIPPLY3-201ENST00000329553 ZFYVE26Q68DK2 2539 aa16.56■□□□□ 0.24
RIPPLY3-201ENST00000329553 TRAV1-1A0A0B4J248 108 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 OR2C1O95371 312 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 S100A8P05109 93 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 THBS3P49746 956 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 C1QL4Q86Z23 238 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 ZNF843Q8N446 348 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 CHODLQ9H9P2 273 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 MIOXQ9UGB7 285 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 H3BP45 60 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 IAPPP10997 89 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 KIR2DS2P43631 304 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 WDR25Q64LD2 544 aaPredicted RBP16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 THNSL2Q86YJ6 484 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 OR8B3Q8NGG8 313 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 NEIL1Q96FI4 390 aaPredicted RBP16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 OR8B2Q96RD0 313 aa16.55■□□□□ 0.24
RIPPLY3-201ENST00000329553 FAM90A26D6RGX4 464 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 IFNA5P01569 189 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 CT45A6P0DMU7 189 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 CT45A5P0DMU8 189 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 CT45A7P0DMV0 189 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 IGHV1-8P0DP01 117 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 RAB2AP61019 212 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 TNFRSF9Q07011 255 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 TMEM267Q0VDI3 215 aaPredicted RBP16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 RAB39BQ96DA2 213 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 ADTRPQ96IZ2 230 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 A0A087WWC5 75 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 SMIM6P0DI80 62 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 UBE2KP61086 200 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 KHDC3LQ587J8 217 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 SSX9Q7RTT3 188 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 VKORC1L1Q8N0U8 176 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 CYB561D1Q8N8Q1 229 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 HSPB7Q9UBY9 170 aa16.54■□□□□ 0.24
RIPPLY3-201ENST00000329553 J3QR06 171 aa16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 OR9G9P0C7N8 305 aa16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 FABP9Q0Z7S8 132 aa16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 OR4S2Q8NH73 311 aa16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 A0A087X0M5 115 aa16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 A0A1B0GX30 115 aa16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 RBMS3Q6XE24 437 aaKnown RBP16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 ZNF833PQ6ZTB9 187 aa16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 ZNF429Q86V71 674 aa16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 ZNF596Q8TC21 504 aa16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 RBKSQ9H477 322 aa16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 SPTAN1Q13813 2472 aaKnown RBP16.53■□□□□ 0.24
RIPPLY3-201ENST00000329553 FBP1P09467 338 aa16.52■□□□□ 0.24
RIPPLY3-201ENST00000329553 NQO2P16083 231 aa16.52■□□□□ 0.24
RIPPLY3-201ENST00000329553 OR2B8PP59922 312 aa16.52■□□□□ 0.24
RIPPLY3-201ENST00000329553 C8orf31Q8N9H6 132 aa16.52■□□□□ 0.24
RIPPLY3-201ENST00000329553 OR10G4Q8NGN3 311 aa16.52■□□□□ 0.24
RIPPLY3-201ENST00000329553 PSENENQ9NZ42 101 aa16.52■□□□□ 0.24
RIPPLY3-201ENST00000329553 PPIAL4CA0A0B4J2A2 164 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 PPIAL4GP0DN37 164 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 ARL16Q0P5N6 197 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 SLC25A24Q6NUK1 477 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 ABHD12Q8N2K0 398 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 LINC00311Q8N616 119 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 ZNF525Q8N782 197 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 LOC102723971A0A1B0GUV8 181 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 RBMXL2O75526 392 aaKnown RBP16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 OR8U8P0C7N1 319 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 TAGLN2P37802 199 aaKnown RBP16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 DLX1P56177 255 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 B2MP61769 119 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 DLK1P80370 383 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 OR10X1Q8NGY0 326 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms