RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SRIP30626 198 aa11.91□□□□□ -0.5
PABPC1-201ENST00000318607 PQLC2Q6ZP29 291 aa11.91□□□□□ -0.5
PABPC1-201ENST00000318607 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
PABPC1-201ENST00000318607 ZNF586Q9NXT0 402 aa11.91□□□□□ -0.5
PABPC1-201ENST00000318607 HBZP02008 142 aa11.91□□□□□ -0.5
PABPC1-201ENST00000318607 OR5G3P0C626 314 aa11.91□□□□□ -0.5
PABPC1-201ENST00000318607 RELBQ01201 579 aa11.91□□□□□ -0.5
PABPC1-201ENST00000318607 GGNQ86UU5 652 aa11.91□□□□□ -0.5
PABPC1-201ENST00000318607 SCCPDHQ8NBX0 429 aa11.91□□□□□ -0.5
PABPC1-201ENST00000318607 HSD17B10Q99714 261 aaKnown RBP11.91□□□□□ -0.5
PABPC1-201ENST00000318607 PMCHL2Q9BQD1 86 aa11.91□□□□□ -0.5
PABPC1-201ENST00000318607 TMEM242Q9NWH2 141 aa11.91□□□□□ -0.5
PABPC1-201ENST00000318607 METRNQ9UJH8 293 aa11.91□□□□□ -0.5
PABPC1-201ENST00000318607 DMXL1Q9Y485 3027 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 IGHV3OR15-7A0A075B7D8 119 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 LRRC30A6NM36 301 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 C17orf112F2Z3M2 114 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 M0QZ24 198 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 PSG5Q15238 335 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 LBHQ53QV2 105 aaPredicted RBP11.9□□□□□ -0.5
PABPC1-201ENST00000318607 RPL39P5Q59GN2 51 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 SAPCD1Q5SSQ6 148 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 C17orf82Q86X59 251 aaPredicted RBP11.9□□□□□ -0.5
PABPC1-201ENST00000318607 LINC00479Q96M42 142 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 SSBP4Q9BWG4 385 aaPredicted RBP11.9□□□□□ -0.5
PABPC1-201ENST00000318607 PCNX2A6NKB5 2137 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 TRAV1-1A0A0B4J248 108 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 C12orf77C9JDV5 145 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 STPG4Q8N801 248 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 RCHY1Q96PM5 261 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 PSMG3Q9BT73 122 aaPredicted RBP11.9□□□□□ -0.5
PABPC1-201ENST00000318607 FBXL7Q9UJT9 491 aa11.9□□□□□ -0.5
PABPC1-201ENST00000318607 SOX8P57073 446 aa11.9□□□□□ -0.51
PABPC1-201ENST00000318607 CATR1Q13166 79 aa11.9□□□□□ -0.51
PABPC1-201ENST00000318607 RNASEKQ6P5S7 137 aaKnown RBP11.9□□□□□ -0.51
PABPC1-201ENST00000318607 MDP1Q86V88 176 aa11.9□□□□□ -0.51
PABPC1-201ENST00000318607 BEND2Q8NDZ0 799 aa11.9□□□□□ -0.51
PABPC1-201ENST00000318607 PXMP4Q9Y6I8 212 aa11.9□□□□□ -0.51
PABPC1-201ENST00000318607 LINC00473A8K010 186 aa11.89□□□□□ -0.51
PABPC1-201ENST00000318607 TMEM250H0YL14 139 aa11.89□□□□□ -0.51
PABPC1-201ENST00000318607 MLANAQ16655 118 aa11.89□□□□□ -0.51
PABPC1-201ENST00000318607 AGBL5Q8NDL9 886 aa11.89□□□□□ -0.51
PABPC1-201ENST00000318607 BRS3P32247 399 aa11.89□□□□□ -0.51
PABPC1-201ENST00000318607 FAM201AQ5SY85 155 aa11.89□□□□□ -0.51
PABPC1-201ENST00000318607 GNB4Q9HAV0 340 aa11.89□□□□□ -0.51
PABPC1-201ENST00000318607 ELOVL5Q9NYP7 299 aa11.89□□□□□ -0.51
PABPC1-201ENST00000318607 A8MXE2 369 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 KLF7O75840 302 aaPredicted RBP11.88□□□□□ -0.51
PABPC1-201ENST00000318607 MMD2Q8IY49 270 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 MS4A5Q9H3V2 200 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 IGLV2-14P01704 120 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 CXCL12P48061 93 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
PABPC1-201ENST00000318607 TRAT1Q6PIZ9 186 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 RNASEH2CQ8TDP1 164 aaKnown RBP11.88□□□□□ -0.51
PABPC1-201ENST00000318607 BORCS7Q96B45 105 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 YTHDF2Q9Y5A9 579 aaKnown RBP11.88□□□□□ -0.51
PABPC1-201ENST00000318607 ARL2-SNX15V9GYD0 113 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 IGLV3-12A0A075B6K2 115 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 RAB4AP20338 218 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 SRD5A2P31213 254 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 GPR12P47775 334 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 VPS25Q9BRG1 176 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 C1QTNF5Q9BXJ0 243 aa11.88□□□□□ -0.51
PABPC1-201ENST00000318607 HAND1O96004 215 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 IGLV3-19P01714 112 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 OR9G9P0C7N8 305 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 ABHD17BQ5VST6 288 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 ASCL4Q6XD76 172 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 TGIF2LYQ8IUE0 185 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 MIEN1Q9BRT3 115 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 SH2D7A6NKC9 451 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-201ENST00000318607 NEURL1O76050 574 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 UBE2NP61088 152 aaKnown RBP11.87□□□□□ -0.51
PABPC1-201ENST00000318607 SLC24A4Q8NFF2 622 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 PHF7Q9BWX1 381 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-201ENST00000318607 NRN1Q9NPD7 142 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 IGHV3-21A0A0B4J1V1 117 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 VSTM5A8MXK1 200 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 GGCTO75223 188 aaKnown RBP11.87□□□□□ -0.51
PABPC1-201ENST00000318607 CSN3P07498 182 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 SRP14P37108 136 aaKnown RBP11.87□□□□□ -0.51
PABPC1-201ENST00000318607 SAXO1Q8IYX7 474 aa11.87□□□□□ -0.51
PABPC1-201ENST00000318607 RNASE8Q8TDE3 154 aaKnown RBP11.87□□□□□ -0.51
PABPC1-201ENST00000318607 GNG4P50150 75 aa11.86□□□□□ -0.51
PABPC1-201ENST00000318607 ZNF137PP52743 207 aa11.86□□□□□ -0.51
PABPC1-201ENST00000318607 COL5A1-AS1Q5SY13 56 aa11.86□□□□□ -0.51
PABPC1-201ENST00000318607 SLC25A40Q8TBP6 338 aa11.86□□□□□ -0.51
PABPC1-201ENST00000318607 HSBP1O75506 76 aa11.86□□□□□ -0.51
PABPC1-201ENST00000318607 Q0VFX4 171 aa11.86□□□□□ -0.51
PABPC1-201ENST00000318607 TMEM95Q3KNT9 176 aa11.86□□□□□ -0.51
PABPC1-201ENST00000318607 OR2Y1Q8NGV0 311 aa11.86□□□□□ -0.51
PABPC1-201ENST00000318607 IMMP1LQ96LU5 166 aa11.86□□□□□ -0.51
PABPC1-201ENST00000318607 LOXL2Q9Y4K0 774 aa11.86□□□□□ -0.51
PABPC1-201ENST00000318607 ATP1A1-AS1Q5TC04 95 aa11.85□□□□□ -0.51
PABPC1-201ENST00000318607 MRPL14Q6P1L8 145 aaKnown RBP11.85□□□□□ -0.51
PABPC1-201ENST00000318607 TMEM14EPQ6UXP3 125 aa11.85□□□□□ -0.51
PABPC1-201ENST00000318607 MIR17HGQ75NE6 70 aa11.85□□□□□ -0.51
PABPC1-201ENST00000318607 STPG3Q8N7X2 389 aa11.85□□□□□ -0.51
PABPC1-201ENST00000318607 OR13A1Q8NGR1 328 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms