RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 HLA-DQA1P01909 254 aa19.64■□□□□ 0.73
TARBP1-201ENST00000040877 DLX1P56177 255 aa19.64■□□□□ 0.73
TARBP1-201ENST00000040877 TWIST1Q15672 202 aa19.64■□□□□ 0.73
TARBP1-201ENST00000040877 TCF21O43680 179 aa19.64■□□□□ 0.73
TARBP1-201ENST00000040877 GCSHP23434 173 aa19.64■□□□□ 0.73
TARBP1-201ENST00000040877 TSPOP30536 169 aa19.64■□□□□ 0.73
TARBP1-201ENST00000040877 C9orf106Q8NAJ2 232 aa19.64■□□□□ 0.73
TARBP1-201ENST00000040877 SSBP3Q9BWW4 388 aaPredicted RBP19.64■□□□□ 0.73
TARBP1-201ENST00000040877 CIDEAO60543 219 aa19.64■□□□□ 0.73
TARBP1-201ENST00000040877 NPPCP23582 126 aa19.64■□□□□ 0.73
TARBP1-201ENST00000040877 PLAUP00749 431 aa19.63■□□□□ 0.73
TARBP1-201ENST00000040877 TFPI2P48307 235 aa19.63■□□□□ 0.73
TARBP1-201ENST00000040877 RAX2Q96IS3 184 aa19.63■□□□□ 0.73
TARBP1-201ENST00000040877 C1QL2Q7Z5L3 287 aa19.63■□□□□ 0.73
TARBP1-201ENST00000040877 A0A1B0GTI1 187 aa19.63■□□□□ 0.73
TARBP1-201ENST00000040877 KBTBD11-OT1A0A1B0GTJ5 212 aa19.63■□□□□ 0.73
TARBP1-201ENST00000040877 C1QL1O75973 258 aa19.63■□□□□ 0.73
TARBP1-201ENST00000040877 DHRS11Q6UWP2 260 aa19.63■□□□□ 0.73
TARBP1-201ENST00000040877 AP5S1Q9NUS5 200 aa19.63■□□□□ 0.73
TARBP1-201ENST00000040877 C17orf100A8MU93 164 aa19.63■□□□□ 0.73
TARBP1-201ENST00000040877 RELBQ01201 579 aa19.63■□□□□ 0.73
TARBP1-201ENST00000040877 NPIPB6E9PJ23 425 aa19.62■□□□□ 0.73
TARBP1-201ENST00000040877 TP53RKQ96S44 253 aa19.62■□□□□ 0.73
TARBP1-201ENST00000040877 GPHA2Q96T91 129 aa19.62■□□□□ 0.73
TARBP1-201ENST00000040877 NPIPB7O75200 414 aa19.62■□□□□ 0.73
TARBP1-201ENST00000040877 NABP2Q9BQ15 211 aa19.62■□□□□ 0.73
TARBP1-201ENST00000040877 DANCRP0C864 163 aa19.62■□□□□ 0.73
TARBP1-201ENST00000040877 UCP1P25874 307 aa19.62■□□□□ 0.73
TARBP1-201ENST00000040877 C17orf82Q86X59 251 aaPredicted RBP19.62■□□□□ 0.73
TARBP1-201ENST00000040877 LINC00312Q9Y6C7 94 aa19.62■□□□□ 0.73
TARBP1-201ENST00000040877 GVINP1Q7Z2Y8 2422 aa19.62■□□□□ 0.73
TARBP1-201ENST00000040877 LY6EQ16553 131 aa19.61■□□□□ 0.73
TARBP1-201ENST00000040877 NHLRC3Q5JS37 347 aa19.61■□□□□ 0.73
TARBP1-201ENST00000040877 FBLN5Q9UBX5 448 aa19.61■□□□□ 0.73
TARBP1-201ENST00000040877 CACNA1EQ15878 2313 aa19.61■□□□□ 0.73
TARBP1-201ENST00000040877 A0A0G2JK05 382 aa19.61■□□□□ 0.73
TARBP1-201ENST00000040877 RRN3P1Q2M238 152 aa19.61■□□□□ 0.73
TARBP1-201ENST00000040877 TBX15Q96SF7 602 aa19.61■□□□□ 0.73
TARBP1-201ENST00000040877 IGFBP3P17936 291 aaPredicted RBP19.61■□□□□ 0.73
TARBP1-201ENST00000040877 VN1R17PQ8TDU5 208 aa19.61■□□□□ 0.73
TARBP1-201ENST00000040877 PQLC2LA1A4F0 135 aa19.61■□□□□ 0.73
TARBP1-201ENST00000040877 CD59P13987 128 aa19.61■□□□□ 0.73
TARBP1-201ENST00000040877 NPIPB3Q92617 1050 aa19.61■□□□□ 0.73
TARBP1-201ENST00000040877 EIF3GO75821 320 aaKnown RBP eCLIP19.6■□□□□ 0.73
TARBP1-201ENST00000040877 ZNF385CQ66K41 422 aaPredicted RBP19.6■□□□□ 0.73
TARBP1-201ENST00000040877 ARL14EPLP0DKL9 152 aa19.6■□□□□ 0.73
TARBP1-201ENST00000040877 COL5A1-AS1Q5SY13 56 aa19.6■□□□□ 0.73
TARBP1-201ENST00000040877 OR8A1Q8NGG7 326 aa19.6■□□□□ 0.73
TARBP1-201ENST00000040877 SHISA3A0PJX4 238 aa19.59■□□□□ 0.73
TARBP1-201ENST00000040877 CA7P43166 264 aa19.59■□□□□ 0.73
TARBP1-201ENST00000040877 ZFP30Q9Y2G7 519 aa19.59■□□□□ 0.73
TARBP1-201ENST00000040877 PDCD11Q14690 1871 aaKnown RBP19.59■□□□□ 0.73
TARBP1-201ENST00000040877 LOC102724200A0A096LPH7 203 aaPredicted RBP19.59■□□□□ 0.73
TARBP1-201ENST00000040877 CXorf65A6NEN9 183 aa19.59■□□□□ 0.73
TARBP1-201ENST00000040877 RPL39P5Q59GN2 51 aa19.59■□□□□ 0.73
TARBP1-201ENST00000040877 EAF1Q96JC9 268 aaPredicted RBP19.59■□□□□ 0.73
TARBP1-201ENST00000040877 TRGC2P03986 189 aa19.59■□□□□ 0.73
TARBP1-201ENST00000040877 CENPVQ7Z7K6 275 aaPredicted RBP19.59■□□□□ 0.73
TARBP1-201ENST00000040877 GCGP01275 180 aa19.58■□□□□ 0.73
TARBP1-201ENST00000040877 MDKP21741 143 aaPredicted RBP19.58■□□□□ 0.73
TARBP1-201ENST00000040877 DCTN5Q9BTE1 182 aa19.58■□□□□ 0.73
TARBP1-201ENST00000040877 AUP1Q9Y679 476 aa19.58■□□□□ 0.73
TARBP1-201ENST00000040877 VKORC1L1Q8N0U8 176 aa19.58■□□□□ 0.73
TARBP1-201ENST00000040877 FAM216BQ8N7L0 139 aa19.58■□□□□ 0.72
TARBP1-201ENST00000040877 FAM168AQ92567 244 aa19.58■□□□□ 0.72
TARBP1-201ENST00000040877 CCL1P22362 96 aa19.58■□□□□ 0.72
TARBP1-201ENST00000040877 DDTP30046 118 aa19.58■□□□□ 0.72
TARBP1-201ENST00000040877 GTF3AQ92664 365 aaKnown RBP19.58■□□□□ 0.72
TARBP1-201ENST00000040877 CD99P14209 185 aa19.57■□□□□ 0.72
TARBP1-201ENST00000040877 ZNF837Q96EG3 531 aaPredicted RBP19.57■□□□□ 0.72
TARBP1-201ENST00000040877 WBP1Q96G27 269 aa19.57■□□□□ 0.72
TARBP1-201ENST00000040877 SRSF9Q13242 221 aaKnown RBP eCLIP19.57■□□□□ 0.72
TARBP1-201ENST00000040877 OR13A1Q8NGR1 328 aa19.57■□□□□ 0.72
TARBP1-201ENST00000040877 MPTX1A8MV57 137 aa19.57■□□□□ 0.72
TARBP1-201ENST00000040877 CA2P00918 260 aa19.57■□□□□ 0.72
TARBP1-201ENST00000040877 CKS2P33552 79 aa19.57■□□□□ 0.72
TARBP1-201ENST00000040877 SNRPD3P62318 126 aaKnown RBP19.57■□□□□ 0.72
TARBP1-201ENST00000040877 A0A0G2JLM5 398 aa19.57■□□□□ 0.72
TARBP1-201ENST00000040877 LYPD3O95274 346 aa19.57■□□□□ 0.72
TARBP1-201ENST00000040877 REG1AP05451 166 aa19.57■□□□□ 0.72
TARBP1-201ENST00000040877 E9PLN8 166 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 VKORC1Q9BQB6 163 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 A6NDN8 102 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 PSMB2P49721 201 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 SAPCD1Q5SSQ6 148 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 IFI27L2Q9H2X8 130 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 TMEM250H0YL14 139 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 SNRPCP09234 159 aaKnown RBP19.56■□□□□ 0.72
TARBP1-201ENST00000040877 TMEM177Q53S58 311 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 LOC105371267A0A1B0GV96 52 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 ZNF207O43670 478 aaKnown RBP19.56■□□□□ 0.72
TARBP1-201ENST00000040877 C2orf68Q2NKX9 166 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 DEPPQ9NTK1 212 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 DCAF16Q9NXF7 216 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 PHLDA3Q9Y5J5 127 aa19.56■□□□□ 0.72
TARBP1-201ENST00000040877 CX3CL1P78423 397 aa19.55■□□□□ 0.72
TARBP1-201ENST00000040877 CYP2G1PQ6ZSU1 146 aa19.55■□□□□ 0.72
TARBP1-201ENST00000040877 DOCK6Q96HP0 2047 aa19.55■□□□□ 0.72
TARBP1-201ENST00000040877 IL4P05112 153 aa19.55■□□□□ 0.72
TARBP1-201ENST00000040877 ANOS1P23352 680 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms