RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 SPINK9Q5DT21 86 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 LRTM2Q8N967 370 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 RCL1Q9Y2P8 373 aaKnown RBP14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 M0R1X1 148 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 SSSCA1O60232 199 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 FABP1P07148 127 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 SULT1A1P50225 295 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 HTD2P86397 168 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 DIAPH2-AS1Q14236 149 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 C11orf71Q6IPW1 123 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 FAM213BQ8TBF2 198 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 IFI27L2Q9H2X8 130 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 NIT2Q9NQR4 276 aa14.97□□□□□ -0.01
SNAPC3-207ENST00000610884 TMEM50AO95807 157 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 CR1LQ2VPA4 569 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 NMSQ5H8A3 153 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 ZNF251Q9BRH9 671 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 CACNG5Q9UF02 275 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 F2RL2O00254 374 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 FCGR3BO75015 233 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 NQO2P16083 231 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 S100GP29377 79 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 LRRC10Q5BKY1 277 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 GSN-AS1Q9NRJ2 163 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 GFOD1Q9NXC2 390 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 RFNGQ9Y644 331 aa14.95□□□□□ -0.02
SNAPC3-207ENST00000610884 USP9YO00507 2555 aaPredicted RBP14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 SAA2-SAA4A0A096LPE2 208 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 ST8SIA3O43173 380 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 SAA2P0DJI9 122 aaPredicted RBP14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 RPS16P62249 146 aaKnown RBP14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 PAX5Q02548 391 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 SRSF1Q07955 248 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 GPR157Q5UAW9 335 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 RAB1BQ9H0U4 201 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 SLC35B3Q9H1N7 401 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 TUBA4BQ9H853 241 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 PLEKHF2Q9H8W4 249 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 TMED3Q9Y3Q3 217 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 TXNL1O43396 289 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 VDAC1P21796 283 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 EIF4EBP1Q13541 118 aaPredicted RBP14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 CLINT1Q14677 625 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 OR4D5Q8NGN0 318 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 ABHD14AQ9BUJ0 271 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 PBDC1Q9BVG4 233 aa14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 METTL1Q9UBP6 276 aaKnown RBP14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 STRAPQ9Y3F4 350 aaKnown RBP14.94□□□□□ -0.02
SNAPC3-207ENST00000610884 hADV38S2A0JD32 116 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 FAM24AA6NFZ4 105 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 A6NNC1 897 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 GPR37O15354 613 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 COL8A1P27658 744 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 ODF3L1Q8IXM7 274 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 IDI2-AS1Q9NZ38 188 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 JPT1Q9UK76 154 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 YPEL1O60688 119 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 OR8U8P0C7N1 319 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 RHEBQ15382 184 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 ZNF714Q96N38 554 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 YPEL2Q96QA6 119 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 RARRES2Q99969 163 aa14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 SEBOXQ9HB31 216 aaPredicted RBP14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 PUS1Q9Y606 427 aaKnown RBP eCLIP14.93□□□□□ -0.02
SNAPC3-207ENST00000610884 ZANQ9Y493 2812 aa14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 WRBO00258 174 aa14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 NKX2-1P43699 371 aaPredicted RBP14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 RAB5CP51148 216 aa14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 EWSR1Q01844 656 aaKnown RBP eCLIP14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 ZNF841Q6ZN19 808 aa14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 KIAA1324LA8MWY0 1029 aaPredicted RBP14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 CHST1O43916 411 aa14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 IGHV2-70P01814 119 aa14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 IGHV2-5P01817 119 aa14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 IAPPP10997 89 aa14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 DUTP33316 252 aaKnown RBP14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 PPOXP50336 477 aa14.92□□□□□ -0.02
SNAPC3-207ENST00000610884 PTPN13Q12923 2485 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 TRAV20A0A0B4J274 112 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 CLN5O75503 358 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 IGFBP2P18065 325 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 ZNF525Q8N782 197 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 TMEM217Q8N7C4 229 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 LIN7CQ9NUP9 197 aaKnown RBP14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 LINC00312Q9Y6C7 94 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 TNCP24821 2201 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 CST7O76096 145 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 CEBPGP53567 150 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 TRAT1Q6PIZ9 186 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 EDARADDQ8WWZ3 215 aa14.91□□□□□ -0.02
SNAPC3-207ENST00000610884 PLXNB1O43157 2135 aa14.9□□□□□ -0.02
SNAPC3-207ENST00000610884 C11orf42Q8N5U0 333 aa14.9□□□□□ -0.02
SNAPC3-207ENST00000610884 TCEAL7Q9BRU2 100 aa14.9□□□□□ -0.02
SNAPC3-207ENST00000610884 RPUSD1Q9UJJ7 312 aaKnown RBP14.9□□□□□ -0.02
SNAPC3-207ENST00000610884 ZNF729A6NN14 1252 aaPredicted RBP14.9□□□□□ -0.02
SNAPC3-207ENST00000610884 CCL20P78556 96 aa14.9□□□□□ -0.02
SNAPC3-207ENST00000610884 MRPS11P82912 194 aaKnown RBP14.9□□□□□ -0.02
SNAPC3-207ENST00000610884 SOHLH1Q5JUK2 328 aa14.9□□□□□ -0.02
SNAPC3-207ENST00000610884 FAM209BQ5JX69 171 aa14.9□□□□□ -0.02
SNAPC3-207ENST00000610884 OR2C3Q8N628 320 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms