RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SRYQ05066 204 aa13.67□□□□□ -0.22
LINC00554-201ENST00000564841 ACSF3Q4G176 576 aaPredicted RBP13.67□□□□□ -0.22
LINC00554-201ENST00000564841 FBLN7Q53RD9 439 aa13.67□□□□□ -0.22
LINC00554-201ENST00000564841 ZNF324BQ6AW86 544 aaPredicted RBP13.67□□□□□ -0.22
LINC00554-201ENST00000564841 UHRF2Q96PU4 802 aa13.67□□□□□ -0.22
LINC00554-201ENST00000564841 KRASP01116 189 aa13.67□□□□□ -0.22
LINC00554-201ENST00000564841 GFRA1P56159 465 aa13.67□□□□□ -0.22
LINC00554-201ENST00000564841 LDLRAD2Q5SZI1 272 aa13.67□□□□□ -0.22
LINC00554-201ENST00000564841 ZIC4Q8N9L1 334 aa13.67□□□□□ -0.22
LINC00554-201ENST00000564841 OR1F12Q8NHA8 337 aa13.67□□□□□ -0.22
LINC00554-201ENST00000564841 IL36GQ9NZH8 169 aa13.67□□□□□ -0.22
LINC00554-201ENST00000564841 OR2W1Q9Y3N9 320 aa13.67□□□□□ -0.22
LINC00554-201ENST00000564841 A0A096LPE4 126 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 A0A1W2PPZ6 126 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 ZIC3O60481 467 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 NTF3P20783 257 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 EDDM3BP56851 147 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 ATP1A1-AS1Q5TC04 95 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 TMEM42Q69YG0 159 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 VASH2Q86V25 355 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 ST6GALNAC6Q969X2 333 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 APOBEC3DQ96AK3 386 aaPredicted RBP13.66□□□□□ -0.22
LINC00554-201ENST00000564841 HES7Q9BYE0 225 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 DEPPQ9NTK1 212 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 ZNF586Q9NXT0 402 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 CLDN14O95500 239 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 C3orf79P0CE67 100 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 ZNF738Q8NE65 137 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 OR10G8Q8NGN5 311 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 NPCDR1Q9BY65 106 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 MTCH1Q9NZJ7 389 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 DCHS1Q96JQ0 3298 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 hCG_38984A0A1B0GV85 526 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 K7EN84 100 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 CXCL13O43927 109 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 RAMP3O60896 148 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 P04436 131 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 TSPOP30536 169 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 TIMP3P35625 211 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 WIPI1Q5MNZ9 446 aaPredicted RBP13.66□□□□□ -0.22
LINC00554-201ENST00000564841 PROK2Q9HC23 129 aa13.66□□□□□ -0.22
LINC00554-201ENST00000564841 SYNGR1O43759 233 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 ZG16O60844 167 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 COX5AP20674 150 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 CDC34P49427 236 aaPredicted RBP13.65□□□□□ -0.22
LINC00554-201ENST00000564841 ZNF83P51522 516 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 LINC00205P59089 165 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 RELBQ01201 579 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 VAMP3Q15836 100 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 C10orf128Q5T292 105 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 TMEM14EPQ6UXP3 125 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 FOXL2NBQ6ZUU3 175 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 FGFRL1Q8N441 504 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 G6PCP35575 357 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 TCL1AP56279 114 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 HES3Q5TGS1 186 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 OR8I2Q8N0Y5 310 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 TMEM54Q969K7 222 aa13.65□□□□□ -0.22
LINC00554-201ENST00000564841 IGHV2OR16-5A0A0B4J2B6 119 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 A0A1W2PS18 150 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 DKK1O94907 266 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 TNFSF15O95150 251 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 TMEM164Q5U3C3 297 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 ZNF292O60281 2723 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 KIAA1549Q9HCM3 1950 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 TOMM40O96008 361 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 ESDP10768 282 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 LIFP15018 202 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 ABHD3Q8WU67 409 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 MT-CO3P00414 261 aa13.64□□□□□ -0.23
LINC00554-201ENST00000564841 ZNF816Q0VGE8 651 aaPredicted RBP13.64□□□□□ -0.23
LINC00554-201ENST00000564841 DPRXA6NFQ7 191 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 A8MXE2 369 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 RRHO14718 337 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 TMPRSS2O15393 492 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 CEACAM16Q2WEN9 425 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 SLC25A53Q5H9E4 307 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 FAM27BQ5VT28 67 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 NAT8BQ9UHF3 227 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 KIR2DS1A0A191URI9 304 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 ODAMA1E959 279 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 ZNF253O75346 499 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 PSG1P11464 419 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 GDF1P27539 372 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 KIR2DS4P43632 304 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 KIR2DS1Q14954 304 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 OR56B2PQ8NGI1 322 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 OR5A2Q8NGI9 324 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 QTRT1Q9BXR0 403 aaKnown RBP13.63□□□□□ -0.23
LINC00554-201ENST00000564841 PRR14LQ5THK1 2151 aa13.63□□□□□ -0.23
LINC00554-201ENST00000564841 PIEZO2Q9H5I5 2752 aa13.62□□□□□ -0.23
LINC00554-201ENST00000564841 IGHV2-70DA0A0C4DH43 119 aa13.62□□□□□ -0.23
LINC00554-201ENST00000564841 PINLYPA6NC86 204 aa13.62□□□□□ -0.23
LINC00554-201ENST00000564841 SLC25A6P12236 298 aa13.62□□□□□ -0.23
LINC00554-201ENST00000564841 FOXG1P55316 489 aaPredicted RBP13.62□□□□□ -0.23
LINC00554-201ENST00000564841 NIT1Q86X76 327 aa13.62□□□□□ -0.23
LINC00554-201ENST00000564841 FADS6Q8N9I5 356 aa13.62□□□□□ -0.23
LINC00554-201ENST00000564841 FAM166BA8MTA8 275 aa13.62□□□□□ -0.23
LINC00554-201ENST00000564841 SYNGR4O95473 234 aa13.62□□□□□ -0.23
LINC00554-201ENST00000564841 CD99P14209 185 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms