RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 HLA-DQB1P01920 261 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A15PP0C7V4 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A13PP0C7W8 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A14PP0C7W9 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A24PP0C7X0 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FXYD3Q14802 87 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 MEIG1Q5JSS6 88 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 ADAMTS7Q9UKP4 1686 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 C7orf71A4D174 169 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A26D6RGX4 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 S1PR2O95136 353 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 ARL14EPLP0DKL9 152 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 TCF24Q7RTU0 167 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 SHISA5Q8N114 240 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 TMEM52Q8NDY8 209 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 GPR146Q96CH1 333 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 MRAP2Q96G30 205 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 ATP6V0BQ99437 205 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 TRBV9A0A0B4J1U6 114 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 FAM181BA6NEQ2 426 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 IL11P20809 199 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 UCP3P55916 312 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 CXorf66Q5JRM2 361 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-208ENST00000538570 POC1AQ8NBT0 407 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 QTRT1Q9BXR0 403 aaKnown RBP8.55□□□□□ -1.04
COL4A6-208ENST00000538570 IDI2-AS1Q9NZ38 188 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 A0A0J9YW62 118 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 FOXS1O43638 330 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 NGFRP08138 427 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 SLC25A53Q5H9E4 307 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 SRSF12Q8WXF0 261 aaKnown RBP8.55□□□□□ -1.04
COL4A6-208ENST00000538570 SPSB4Q96A44 273 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 GPR82Q96P67 336 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 AQP10Q96PS8 301 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 SS18L2Q9UHA2 77 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 PAPPAQ13219 1627 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 CENPVL1A0A0U1RR11 272 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 C8orf88P0DMB2 117 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 FGF5P12034 268 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 ZFP36L2P47974 494 aaKnown RBP8.55□□□□□ -1.04
COL4A6-208ENST00000538570 RND2P52198 227 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 TMPRSS3P57727 454 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 UNQ5815/PRO19632Q6UWF5 114 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 FGFRL1Q8N441 504 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 SPINT1O43278 529 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 H2BFSP57053 126 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 RAX2Q96IS3 184 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 ZNF257Q9Y2Q1 563 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 ZNF658BQ4V348 819 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-208ENST00000538570 GCSAMLQ5JQS6 135 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 LAMTOR1Q6IAA8 161 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 AQP3Q92482 292 aa8.55□□□□□ -1.04
COL4A6-208ENST00000538570 IGKV3D-11A0A0A0MRZ8 115 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 IGKV3-11P04433 115 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 ISG15P05161 165 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 DUSP15Q9H1R2 295 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-208ENST00000538570 hCG_38984A0A1B0GV85 526 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 IFNL4K9M1U5 179 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 UNC119Q13432 240 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 WNT5BQ9H1J7 359 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 IL9P15248 144 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 ITLN1Q8WWA0 313 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 SH3BGRL3Q9H299 93 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 BCORQ6W2J9 1755 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 A0A1W2PP11 408 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 RPS11P62280 158 aaKnown RBP eCLIP8.54□□□□□ -1.04
COL4A6-208ENST00000538570 UBE2V1Q13404 147 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 P2RY6Q15077 328 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 APCDD1LQ8NCL9 501 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 GCM2O75603 506 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-208ENST00000538570 LIMS1P48059 325 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 OR52M1Q8NGK5 317 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 OR4D5Q8NGN0 318 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 TSPAN2O60636 221 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 DNAL4O96015 105 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 DANCRP0C864 163 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 PAX2Q02962 417 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 ZNF415Q09FC8 603 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 FAM214BQ7L5A3 538 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 BIVMQ86UB2 503 aa8.54□□□□□ -1.04
COL4A6-208ENST00000538570 HSPE1P61604 102 aaKnown RBP8.53□□□□□ -1.04
COL4A6-208ENST00000538570 FAM106AQ4KMX7 169 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 C19orf24Q9BVV8 132 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 CRYBB3P26998 211 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 PLAURQ03405 335 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 OR51G1Q8NGK1 321 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 KLK15Q9H2R5 256 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 GPX1P07203 203 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 PSG1P11464 419 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 EFNB1P98172 346 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 SLC25A47Q6Q0C1 308 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 MRPL32Q9BYC8 188 aaKnown RBP8.53□□□□□ -1.04
COL4A6-208ENST00000538570 CALYQ9NYX4 217 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 COX5BP10606 129 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 TSPOP30536 169 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 MBNL2Q5VZF2 373 aaKnown RBP8.53□□□□□ -1.04
COL4A6-208ENST00000538570 KIR2DL4Q99706 377 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 IGHV1-45A0A0A0MS14 117 aa8.53□□□□□ -1.04
COL4A6-208ENST00000538570 A0A1B0GWJ7 208 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms