RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SRSF7Q16629 238 aaKnown RBP eCLIP10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 SPATA45Q537H7 98 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 KCNIP2Q9NS61 270 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 ATG2AQ2TAZ0 1938 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 TNFSF13O75888 250 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 CELA3AP09093 270 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 HOXA4Q00056 320 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 FXYD3Q14802 87 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 ABHD17BQ5VST6 288 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 LINC00596Q86U02 117 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 SCCPDHQ8NBX0 429 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 WNT10AQ9GZT5 417 aa10.78□□□□□ -0.68
TRAPPC9-208ENST00000520857 HBZP02008 142 aa10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 B3GALT5-AS1P59052 145 aa10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 UBE2NP61088 152 aaKnown RBP10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 RPP30P78346 268 aaKnown RBP10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 MRPL49Q13405 166 aaKnown RBP10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 RAB31Q13636 194 aa10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 RPEL1Q2QD12 228 aa10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 ZNF645Q8N7E2 425 aa10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 OR4P4Q8NGL7 312 aa10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 DNASE2BQ8WZ79 361 aa10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 WDR54Q9H977 334 aa10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 WIPI2Q9Y4P8 454 aa10.77□□□□□ -0.68
TRAPPC9-208ENST00000520857 CADP27708 2225 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 GPR179Q6PRD1 2367 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 TRIOBPQ9H2D6 2365 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 ZNF503-AS2A6NEH8 195 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 HAND1O96004 215 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 BTF3P20290 206 aaKnown RBP10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 KIR2DL5BA0A0G2JN68 375 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 KIR2DL5BA0A0G2JPC4 375 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 F2Z2F3 143 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 OR7C2O60412 319 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 GPR12P47775 334 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 HINT1P49773 126 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 KIR2DL5AQ8N109 375 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 ABHD12Q8N2K0 398 aa10.77□□□□□ -0.69
TRAPPC9-208ENST00000520857 C12orf77C9JDV5 145 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 WNT9BO14905 357 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 RPL15P61313 204 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 MMD2Q8IY49 270 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 NANOS1Q8WY41 292 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 TAAR6Q96RI8 345 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 HES7Q9BYE0 225 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 TBL2Q9Y4P3 447 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 SPTBN5Q9NRC6 3674 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 M0R1X1 148 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 NEURL1O76050 574 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 SSTR5P35346 364 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 IL11RAQ14626 422 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 TIGITQ495A1 244 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 PINLYPA6NC86 204 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 KLF7O75840 302 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 PAX1P15863 534 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 BRS3P32247 399 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 GNG4P50150 75 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 TBC1D28Q2M2D7 210 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 DOLPP1Q86YN1 238 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 GCNT2Q8N0V5 402 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 FAM19A2Q8N3H0 131 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 PCED1AQ9H1Q7 454 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 FZR1Q9UM11 496 aa10.76□□□□□ -0.69
TRAPPC9-208ENST00000520857 ZNF318Q5VUA4 2279 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 CXorf1O96002 111 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 TIMP3P35625 211 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 FOXL1Q12952 345 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 COLCA1Q6ZS62 124 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 POM121L2Q96KW2 1035 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 CELSR3Q9NYQ7 3312 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 CLDN14O95500 239 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 OR5G3P0C626 314 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 MAGEA5P43359 124 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 KRTCAP3Q53RY4 240 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 ZNF497Q6ZNH5 498 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 MDP1Q86V88 176 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 Q8NFD4 153 aa10.75□□□□□ -0.69
TRAPPC9-208ENST00000520857 IGLV2-14P01704 120 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 GNG10P50151 68 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 ARG2P78540 354 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 RNPS1Q15287 305 aaKnown RBP10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 Q8IYB0 196 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 SLC35D1Q9NTN3 355 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 LOC102723996A0A087X1L8 192 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 SPINT2O43291 252 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 CD99P14209 185 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 PSG5Q15238 335 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 TIPARPQ7Z3E1 657 aaKnown RBP10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 OR4B1Q8NGF8 309 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 DCTN5Q9BTE1 182 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 STRADBQ9C0K7 418 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 ZNF576Q9H609 170 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 SRIP30626 198 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 ALKBH6Q3KRA9 238 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 ETFRF1Q6IPR1 90 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 HSD17B10Q99714 261 aaKnown RBP10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 IL36BQ9NZH7 164 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 EXPH5Q8NEV8 1989 aa10.74□□□□□ -0.69
TRAPPC9-208ENST00000520857 TRBV20OR9-2A0A075B6H5 130 aa10.73□□□□□ -0.69
TRAPPC9-208ENST00000520857 PSPNO60542 156 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms