RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 LRRK2Q5S007 2527 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 COL24A1Q17RW2 1714 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 UNC13BO14795 1591 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 ABCA13Q86UQ4 5058 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 OTOGQ6ZRI0 2925 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 FAM135BQ49AJ0 1406 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 UHRF1BP1Q6BDS2 1440 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 IGHV3-15A0A0B4J1V0 119 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 GRIFINA4D1Z8 144 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 GOLGA6L10A6NI86 522 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 METTL15A6NJ78 407 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 CCRL2O00421 344 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 UBFD1O14562 309 aaKnown RBP0.84□□□□□ -2.27
ITGB1-216ENST00000493758 ZW10O43264 779 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 CALUO43852 315 aaPredicted RBP0.84□□□□□ -2.27
ITGB1-216ENST00000493758 STX10O60499 249 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 NDUFS6O75380 124 aaKnown RBP0.84□□□□□ -2.27
ITGB1-216ENST00000493758 PSMG1O95456 288 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 ORM1P02763 201 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 CRYBA1P05813 215 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 CD7P09564 240 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 LINC00614P0C842 121 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 OCMP0CE72 109 aaPredicted RBP0.84□□□□□ -2.27
ITGB1-216ENST00000493758 ESDP10768 282 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 ALOX5APP20292 161 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 GRPRP30550 384 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 OPRM1P35372 400 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 CRATP43155 626 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 H2BFSP57053 126 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 RELAQ04206 551 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 SMAGPQ0VAQ4 97 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 CLEC6AQ6EIG7 209 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 OR7G1Q8NGA0 311 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 OR5L1Q8NGL2 311 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 SPACA4Q8TDM5 124 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 TLCD1Q96CP7 247 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 ACY3Q96HD9 319 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 HHLA2Q9UM44 414 aa0.84□□□□□ -2.27
ITGB1-216ENST00000493758 MRPS16Q9Y3D3 137 aaKnown RBP0.84□□□□□ -2.27
ITGB1-216ENST00000493758 SHROOM2Q13796 1616 aa0.84□□□□□ -2.28
ITGB1-216ENST00000493758 MEGF8Q7Z7M0 2845 aa0.84□□□□□ -2.28
ITGB1-216ENST00000493758 PLB1Q6P1J6 1458 aa0.84□□□□□ -2.28
ITGB1-216ENST00000493758 MYO5BQ9ULV0 1848 aa0.84□□□□□ -2.28
ITGB1-216ENST00000493758 ADGRG4Q8IZF6 3080 aa0.84□□□□□ -2.28
ITGB1-216ENST00000493758 PIK3C2AO00443 1686 aa0.84□□□□□ -2.28
ITGB1-216ENST00000493758 CEP170BQ9Y4F5 1589 aaPredicted RBP0.83□□□□□ -2.28
ITGB1-216ENST00000493758 SCRIBQ14160 1630 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 GPR98Q8WXG9 6306 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 TRAV8-1A0A0A6YYK1 113 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 TMEM235A6NFC5 223 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 FTCDNL1E5RQL4 147 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 GOLGA8RI6L899 631 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 UBE2L6O14933 153 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 GSTZ1O43708 216 aaPredicted RBP0.83□□□□□ -2.28
ITGB1-216ENST00000493758 YEATS4O95619 227 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 IGLV3-27P01718 113 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 HSPA9P38646 679 aaKnown RBP0.83□□□□□ -2.28
ITGB1-216ENST00000493758 TSPEAR-AS2P59090 65 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 TAS2R45P59539 299 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 FGF12P61328 243 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 BTN3A2P78410 334 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 TBC1D28Q2M2D7 210 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 HLA-DRB5Q30154 266 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 SDHAF4Q5VUM1 108 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 SPATA31B1PQ5VZV4 182 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 ATP5L2Q7Z4Y8 100 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 COA5Q86WW8 74 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 PLCZ1Q86YW0 608 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 FNDC9Q8TBE3 224 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 C7orf50Q9BRJ6 194 aaKnown RBP0.83□□□□□ -2.28
ITGB1-216ENST00000493758 MROQ9BYG7 248 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 OR51B6Q9H340 312 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 SPANXB1Q9NS25 103 aaPredicted RBP0.83□□□□□ -2.28
ITGB1-216ENST00000493758 PARVAQ9NVD7 372 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 PUS1Q9Y606 427 aaKnown RBP eCLIP0.83□□□□□ -2.28
ITGB1-216ENST00000493758 TCOF1Q13428 1488 aaKnown RBP0.83□□□□□ -2.28
ITGB1-216ENST00000493758 TET3O43151 1660 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 C3P01024 1663 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 SPHKAPQ2M3C7 1700 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 MAP3K1Q13233 1512 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 CDK13Q14004 1512 aaKnown RBP0.83□□□□□ -2.28
ITGB1-216ENST00000493758 KIAA0586Q9BVV6 1533 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 CNOT1A5YKK6 2376 aaKnown RBP0.83□□□□□ -2.28
ITGB1-216ENST00000493758 ADAMTSL1Q8N6G6 1762 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 FRMPD1Q5SYB0 1578 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 TMEM94Q12767 1356 aa0.83□□□□□ -2.28
ITGB1-216ENST00000493758 NPATQ14207 1427 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 PCNX1Q96RV3 2341 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 ZNF142P52746 1687 aaPredicted RBP0.82□□□□□ -2.28
ITGB1-216ENST00000493758 NCKAP5O14513 1909 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 IFT140Q96RY7 1462 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 SUPT6HQ7KZ85 1726 aaKnown RBP0.82□□□□□ -2.28
ITGB1-216ENST00000493758 ABCA3Q99758 1704 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 FABP12A6NFH5 140 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 SLC17A3O00476 420 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 MRASO14807 208 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 GNRH2O43555 120 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 ADAP1O75689 374 aa0.82□□□□□ -2.28
ITGB1-216ENST00000493758 ZNF705DP0CH99 300 aaPredicted RBP0.82□□□□□ -2.28
ITGB1-216ENST00000493758 ZNF705BP0CI00 300 aaPredicted RBP0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms